Lates calcarifer (barramundi perch): 108900254
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Entry
108900254 CDS
T04895
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108900254
03036 Chromosome and associated proteins [BR:
lcf03036
]
108900254
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108900254
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Topoisomerases
108900254
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108900254
Centrosome formation proteins
Centriole proteins
108900254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
HATPase_c
Toprim
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
108900254
NCBI-ProteinID:
XP_018556738
UniProt:
A0AAJ7QID1
LinkDB
All DBs
Position
LG3:1752103..1778108
Genome browser
AA seq
1605 aa
AA seq
DB search
MSNGAAGSGGLSWMEAANGRGDTGKMEGAKKDKAGSKLSVERVYQKKTQLEHILLRPDTY
IGTVEPITQQMWVFDEDIGMNQREITYVPGLYKIFDEILVNAADNKQRDKNMTAIKITID
PESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDEEKKVTGGRNGYGAKLC
NIFSTKFTVETACKEYRHSFKQTWQNNMTKTSDPKIKFFDGDDFTCVTFQPDLAKFKMEK
LDKDIVALLTRRAYDVAGSCRGVKVTLNGKKLPVNGFRSYVDLYVKDKLDETGVALKVVN
ETVNDRWEVCLTMSEKGFQQISFVNSIATTKGGRHIDYVVDQIVAKLIEVVKKKNKAGVS
VKPFQVKNHIWVFVNALIENPSFDSQTKENMTLQTKSFGSKCPLSEKFIRAATNCGIVES
ILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSSECTLILTEGDSAKSLAV
SGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKIVGLQYKKSYDDPESLRS
LRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHTFLEEFITPIVKVTKSKQELAFY
SIPEFDEWKKQTDNYKTWHIKYYKGLGTSTSKEAKEYFADMERHRITFRYGGVEDDAAIT
LAFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTQARHLSYNDFINKELILFSNSD
NERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVN
LAQNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLF
DDNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLP
SYKNFKGVIHELGQNQYLVSGEVSVIDKNTIEITELPVRTWTQAYKESVLEPMLQGSDKT
PALINDYKEYHTDTTVKFVVRMSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMGCLK
RYDSVQDILREFFELRLHYYKLRKDWLLGSLGAEAAKLSNQARFVLEKIEGKISIENKSK
RELIRMLVQKGYESDPVAAWTKAQEKALEEDYRDGNESDSSVDSGSSSGPNFNYILNMPL
WCLTKEKVEELLKQRDQKRGELNDLQRKTPEDLWKEDLAVFIEELDNVEAQEREEQNLGR
AIKLVKGKVGKPKVKKMNLEETLPSPFGRRVEPPTQPIKSDAAKKLTKKKKGDADSSVKL
EFDDNGLGGEGGTGENSVAKPKTPRVKKEKKEPGAPRVRKPPGTPKGTPAKKVKKRNPWS
DDESKSESDLENSEPLIIPRETKSQRASASKPKYTFDFSEEEDAEEEENGDDDVTSSPMR
SFRDDIAASETKDRYSDHNDDDDDDDDNEVSYSPPKQKTTSAPAAKKKETTSIFSSKSAF
SEKSNDSDGSKSDSDDDNGPVFSTYSSSSAFDKLLPVKKAAMKPSDAAPKPKKPPAPKAK
KPDKSIWDSDSDTGSKKPTPALKGKGRGRKRKGSGSEDEYSPMKKTTKPVSRKPQKPPSD
DEDDDSNSLSVMNTSSRDRPGRAKKEVKYFHESDNEEDDDDNMFD
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacggcgcagcaggaagcgggggtctgtcttggatggaggctgcgaatggcaga
ggtgatactggcaagatggagggggccaagaaagacaaggcaggctccaagctgtctgtg
gagcgagtgtatcaaaagaagacacaactagagcacattcttctccgtccagacacatac
attggcacagtggagcccatcacccagcaaatgtgggtttttgatgaagatataggcatg
aaccagagggaaatcacctatgttcctggactatacaaaatctttgatgaaattcttgtc
aatgcagcagacaacaaacaacgggacaagaacatgactgccattaagatcacaatcgat
cctgagtccaacactatttccatatggaacaatggtaagggaatacctgtggtggagcat
aaggatgaaaagatgtatgtccctgccctcatttttggccacctgctcacctcaagcaac
tatgatgatgaagagaaaaaggtcacaggtggaagaaatgggtacggtgctaaactctgc
aacatattcagtaccaaattcacagtggaaacagcttgcaaagaatacagacacagcttc
aaacagacatggcagaacaacatgaccaagacttctgaccccaagatcaagttctttgat
ggggatgatttcacctgtgtgacattccagccagacctggccaagttcaagatggagaaa
ctggacaaggatattgtagctcttcttacccgcagagcatatgatgtagcaggctcttgc
agaggagttaaagtcactctgaatgggaaaaaattacctgttaatggattccgcagctac
gtggatctctatgtgaaggacaaactggatgagacgggcgtggccctgaaggtggtgaat
gaaactgtgaatgatcggtgggaagtttgcctcaccatgagtgagaaaggatttcaacag
atcagctttgttaacagcattgccactaccaagggtggcagacacattgactatgtggtg
gaccaaattgtggccaagcttattgaagtggtgaagaagaagaataaggcaggagtgtca
gttaaacccttccaggtgaagaaccacatctgggtgtttgtgaatgcactgattgagaat
cccagctttgactcccagacaaaggagaatatgacactccagaccaaaagctttgggtcc
aagtgccctctgtctgaaaagtttatcagggctgcaactaattgcgggattgtggagagt
atactcaactgggtgaagttcaaagctcagacacagctgaataaaaagtgctcctctgtg
aagcacagcaaaatcaaaggcatccccaaactagacgatgccaatgatgctggtggcaaa
cactcctctgaatgcacactcattctcactgagggagactcagccaagtctctagctgtc
tctggactgggagtcattggacgcgatcgttatggagtgttcccactgagaggaaagatc
ctaaatgtgcgagaggcaacacacaagcagatcatggaaaatgctgagatcaacaatatc
atcaaaatcgttgggctccaatacaagaagagctatgatgaccctgagtcactaaggagc
ctgcgctatggcaagatcatgatcatgactgatcaggatcaagatggttcccatatcaaa
ggtctgctcatcaacttctttcatcacaactggccctccctgctgaaacacacattccta
gaggagtttatcacacccattgtcaaggtgaccaagagcaagcaggaactggctttctac
agcattccagagtttgatgagtggaagaaacagacagataactataaaacctggcatata
aagtactacaaaggtttgggtacaagtacaagcaaagaggcaaaggaatactttgctgac
atggagaggcatcgcatcacattcagatacggtggtgtagaggacgatgctgcaatcact
ctggccttcagtaagaaaaagacagatgacaggaaggagtggctgactaacttcatggaa
gacagacgtcagaggaggatgcatggcctgccagagcaatacctatatggaactcaggcc
agacacctctcctacaatgacttcatcaacaaagagttgattttgttctccaactctgac
aacgagagatccattccatctttggttgatggcttgaagccaggtcagaggaaggtgctg
ttcacctgcttgaagaggaatgacaagagggaagtgaaggtagcacagctggccggttca
gtggcagagatgtctgcctaccatcatggagagcaagctctcatgatgaccatagtgaat
ttggcccagaactttgtgggcagtaacaacgtgaacatcctgcagcctcttggtcagttt
ggtactcgtatcaatggaggcaaagatgctgccagccccagatatatttttaccatgctc
agtcctcttgccaagctgttgttcccagcggttgattccaacctgctcaagttccttttt
gatgacaaccagaaagtggagcctgagtggtacattcccatcattccaatggtgctggta
aacggtgctgagggcataggaacaggctgggcatgtaaaatccccaactatgacccccga
gagattgtcaacaacatcaaccgcatgcttaaccaccaggatcccctgccaatgcttccc
agctacaaaaacttcaaaggagtcatccatgaactgggtcagaaccagtacctggtcagt
ggagaggtgtccgtcattgataaaaacaccattgagatcacagagcttcctgtccgcaca
tggacacaggcctataaggagtctgtgctagagcccatgctgcagggcagtgacaaaaca
ccagctctcatcaacgactataaggaatatcacacagataccacagtcaaatttgtcgtc
cgcatgtctgaggagaaactggcccaggctgaggcagttggcctccacaaagtgttcaag
ctgcagtccagcctcacctgcaactccatggttctgtttgaccacatgggttgtctgaag
aggtacgattcagtccaagatatcctcagggagttctttgagctccgcctgcactactac
aaactgaggaaggactggttactgggcagtctgggagcagaggcagccaaactgtccaac
caggctcgctttgtactggagaagattgaaggaaaaatttcaattgagaacaaatcaaaa
cgggaactgatccgcatgctggtccagaaaggctatgaatctgatccggtggcagcctgg
accaaagctcaggaaaaggctctggaagaagattaccgtgatggaaatgaaagcgacagc
tcagtggattctggatcttcttcagggccaaacttcaactacatcctcaatatgcctctg
tggtgcctgactaaagaaaaggtggaggagttgctcaaacagagggaccaaaagagaggt
gaactgaatgatctccagagaaaaacccccgaggatctgtggaaggaggacttggcagtc
ttcattgaagagctggataatgtggaggcccaggagcgagaggagcagaatttaggaagg
gccatcaaactggtgaaaggtaaagtgggcaaacctaaagtgaagaagatgaacctggaa
gagaccctgccctcaccctttggccgtagggtggagcctccaactcaaccaatcaaatct
gatgctgccaagaaactgaccaaaaagaagaagggtgacgcagattcatcggtgaagttg
gagtttgatgataatggtttgggtggagagggaggaactggagaaaattctgtagccaaa
ccaaagactccacgtgtcaagaaagagaagaaagagcctggagctcctagagttagaaaa
cctccaggaacccccaaaggtacccctgctaagaaggtgaagaagagaaacccctggtct
gacgatgagtccaagtcagagagtgacctggagaacagtgagcctctcatcatccccaga
gagactaagtcccagagagcatcagcttccaagccaaaatatacatttgacttctcagaa
gaggaggatgcagaggaagaagagaatggagatgatgatgtgacttcttctccaatgagg
tcattcagagatgacattgctgcgtctgaaaccaaggaccgctacagtgaccataatgat
gatgacgacgacgatgatgacaacgaagtctcatactctcctcccaaacaaaagacaacg
tctgcacctgcagctaaaaagaaggagacaaccagcatcttctcatccaagtcagccttc
tcagaaaaaagcaatgacagtgacgggtccaagtctgacagtgacgacgacaacggccca
gtgttctccacttactccagcagctcggcatttgacaaattattgccagtaaagaaagca
gctatgaagccctctgatgcagctcccaaacctaagaagccaccagcgccaaaagcaaag
aaaccagataagtccatctgggactctgactctgatactgggtctaagaagccaacacca
gctcttaaaggtaaagggcgggggaggaagaggaagggctctggctctgaagatgaatac
agtccaatgaagaaaacaacaaaacctgtcagcagaaagcctcagaaacctccatctgat
gatgaagatgacgacagcaacagcctaagtgtgatgaatacttcatcccgcgaccggcca
ggccgggccaagaaggaggtgaagtacttccacgagtcagacaacgaagaagacgacgac
gacaacatgttcgattaa
DBGET
integrated database retrieval system
