Lates calcarifer (barramundi perch): 108900267
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Entry
108900267 CDS
T04895
Name
(RefSeq) amyloid protein-binding protein 2
KO
K25806
amyloid protein-binding protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108900267
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108900267
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_NPHP3
TPR_7
TPR_1
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
108900267
NCBI-ProteinID:
XP_018556757
UniProt:
A0A4W6C7K9
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Position
LG21:complement(26453747..26468111)
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AA seq
588 aa
AA seq
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MAAVELEWIPETLYNTAISAVVDNYSRSRRDIRSLPENIQFDVYYKLYQQGRLCQLGGEF
CELEVFAKVLRASDKRHLLHHCFQALMDHGVKVASVLANSFSRRCSYIAESDAHVKEKAI
QFGFVLGGFLSDAGWYGDAEKVFLSCLQLCTLHSEVLHCYRAVECCVRLLHVRNGNCKYH
LGEETFKLAQSYMDKLAKHGHQANKAALYGELCALLFAKSHYDEAYRWCIEAMKEITPGL
PVKVVVDVLRQASKACVVKREFRKAEQLIKHAVFLAREHFGHKHPKYSDTLLDYGFYLLN
VDNICQSVAIYQTALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFHAERA
IDIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEERLLQEAHDLHLSSLQLAKKA
FGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGHEDYEVALSVGHLASL
YNYDMNQYEDAERLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSVGNYEKVFEYHNVL
SNWNRLRDRQFAVADALEDVNTTPQQTQEVVQAFLLAQSLGPTRPCLG
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtggagctcgaatggatcccagaaacactgtacaacacggctatatcggct
gtagtggacaactacagccgatcaagaagggacatacgctcgctcccagaaaatatacag
ttcgatgtctattataagctttaccagcagggccggctctgccagcttggaggagagttc
tgtgagctggaggtgtttgccaaagtattgcgggcttcagacaaaagacacctcctgcac
cactgtttccaggccctgatggaccatggtgtgaaagttgcctcagttctggcaaactcc
tttagccgccgctgctcctacatcgcagagtctgacgcccatgtcaaagagaaggccatt
cagttcggctttgttctaggtggattcttgtctgatgcgggctggtatggagatgcagag
aaagtgtttctgtcgtgcctgcagctttgtacactccacagtgaggtcctccattgctac
agggctgtggaatgctgtgtcaggctgctccatgtccgcaatggcaactgtaagtaccac
ctgggggaggagaccttcaagcttgctcagtcttacatggacaaactagccaaacatggc
caccaggccaacaaggcagcgctatatggcgagctttgtgccttgctctttgctaaaagt
cactatgatgaggcatacaggtggtgtatagaggctatgaaggaaattactccagggttg
cctgtcaaagtagtggttgatgttcttcggcaagcgtcaaaggcctgtgtggtgaaaagg
gagttcagaaaagcagagcagctgatcaaacatgcagtgtttctagcaagagaacatttt
ggacacaagcatcccaagtactctgacacgctgctagattatggattttacttgttaaat
gtagacaacatatgccaatcagtggctatttaccagacagctctggacatccgacagtct
gtttttggggggaagaatatccatgttgccacagcccatgaagacctggcctactcctca
tacgtgcaccagtacagctctggaaaatttgacaacgctctattccacgcagaacgtgcc
atagacatcataactcacattctgcctgaggaccatctgctgctggcctcttccaaaaga
gtcaaagccctgatcctggaggaaattgccattgactgccacaataaagagacagaagag
cgccttctgcaggaggctcatgacctgcacctctcgtcgcttcagctggccaagaaggcc
tttggagagttcaatgtccagacagccaaacactacggcaacttaggacgactctaccag
tccatgaggaagttcaaggaggcagaggagatgcacatcaaagccatccagatcaaggag
cagcttctgggccatgaggactatgaggtggctctgtctgtgggtcacctggcgtccctc
tacaactacgacatgaaccagtatgaagacgcagagaggctgtacctgcgctccattgct
atcggtaagaagctgtttggagagggttacagcgggctggagtacgactaccgaggcctg
atcaaactctataactctgttggaaattatgagaaggtgtttgaataccataacgtgttg
tccaactggaaccgactgagggaccggcagtttgctgtggcagatgctctggaggacgtc
aacactacaccccagcagacccaggaggtggtgcaagctttcttattggctcagagcctg
ggccccacccgcccctgtcttggctga
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