Lates calcarifer (barramundi perch): 108900295
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Entry
108900295 CDS
T04895
Symbol
si:ch211-167j9.5
Name
(RefSeq) tyrosine kinase receptor Cad96Ca
KO
K05093
fibroblast growth factor receptor 2 [EC:
2.7.10.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04020
Calcium signaling pathway
lcf04144
Endocytosis
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108900295 (si:ch211-167j9.5)
04020 Calcium signaling pathway
108900295 (si:ch211-167j9.5)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108900295 (si:ch211-167j9.5)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108900295 (si:ch211-167j9.5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcf01001
]
108900295 (si:ch211-167j9.5)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108900295 (si:ch211-167j9.5)
00536 Glycosaminoglycan binding proteins [BR:
lcf00536
]
108900295 (si:ch211-167j9.5)
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
108900295 (si:ch211-167j9.5)
Protein kinases [BR:
lcf01001
]
Receptor tyrosine kinases (RTK)
FGFR family [OT]
108900295 (si:ch211-167j9.5)
CD molecules [BR:
lcf04090
]
Proteins
108900295 (si:ch211-167j9.5)
Glycosaminoglycan binding proteins [BR:
lcf00536
]
Heparan sulfate / Heparin
Growth factors/receptors
108900295 (si:ch211-167j9.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Kinase-like
ABC1
Hol_Tox
Motif
Other DBs
NCBI-GeneID:
108900295
NCBI-ProteinID:
XP_018556805
UniProt:
A0A4W6CIA5
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All DBs
Position
LG21:complement(26379136..26388578)
Genome browser
AA seq
429 aa
AA seq
DB search
MSNSTCPGQSPDWFNYILIGVLSFTIFTVTLLGLVCLRKYHFLAHTIRELQGIKTLPSAV
PRPEAPFVPVRPIPAVEEEGEEELPLQTPLQQSSTVRSSSRRLWKGLQQVPHFTKSDLNL
LQLIKAGKEGVFYQARMTRGTCKGHNMFTCKISKEGVRPKHVDIEVSIMRKLVHHKNILQ
LLDWNTTEEPYILIMEYVSYGTLRTFLQTNRGHLSADPELQSLFTIASYHIALAMQHLRS
KMIVHCDLALRNIVVNKFPWEVKVAEFGLARDLTRITSRHSSRWRNPRQRVPLRWYPPEY
FKNNYYSFKGDVWAFGIVLWEMQTFGTLPYPNLETSEAVMYHICIGHKNTNPEGCRPEII
DIMQDCWLEPYTLRPSFTDIVHMLENIMENDADYVDVESPQFLVQDEAEYHEAKCLRAAS
ITLDDKDPV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctaattccacctgcccaggtcagtccccagactggttcaactacatactcatcgga
gttctctccttcaccatcttcacagtgacactgctggggctcgtgtgtctcagaaaatat
cattttttggcccataccatacgggagctgcaggggatcaagacgttgccgagtgctgtc
cctcggccagaagctcccttcgtacctgtgaggcccatcccagcggtggaggaggagggg
gaggaggagctccctctccagactcccctgcagcagagcagcacagtcaggtcctcatcc
aggaggctgtggaaaggcctgcagcaggttcctcatttcactaagtcagacctgaacctg
ctgcagctgatcaaagcagggaaggagggcgtcttctaccaggccaggatgaccagaggg
acgtgtaaaggccacaacatgttcacatgcaagatcagcaaggaaggcgtccgtcccaag
catgtggacatagaggtctccatcatgaggaaactggtgcaccacaagaacatcctccag
ttactggactggaacaccactgaggagccttacattctgatcatggagtatgtaagctac
ggcactctgaggaccttcctgcagaccaacagaggccacctgagtgcagatcctgaactg
cagagcctcttcaccatcgcctcttaccacatcgctctggccatgcagcacctacgctcc
aaaatgattgtgcactgtgacttggctctgaggaatatcgtggtcaataagtttccctgg
gaggtcaaggtggcagagttcggcctggcccgagacttaacccgcattacgagtcgccat
agcagccgctggagaaacccacggcagcgagtgccgctgcgctggtacccacctgagtac
ttcaagaacaactactacagcttcaaaggagatgtgtgggcctttggcatcgtgctgtgg
gagatgcagacatttggtaccttaccgtacccaaacctggagacatcagaggcagtgatg
taccacatctgtatcggtcataaaaacacaaaccctgaaggctgcagaccagagataatt
gatatcatgcaagactgttggctggagccgtacactctgagaccttcattcacagacatt
gtccacatgttggagaacatcatggaaaacgatgcagattatgtggatgttgagagccca
cagtttttggtgcaagatgaggctgaatatcatgaggcaaaatgtctgcgagcagccagc
atcaccctggatgataaagatccagtctga
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