Lates calcarifer (barramundi perch): 108900404
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Entry
108900404 CDS
T04895
Symbol
si:dkey-166k12.1
Name
(RefSeq) solute carrier family 22 member 13
KO
K08209
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 13
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108900404 (si:dkey-166k12.1)
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
108900404 (si:dkey-166k12.1)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
108900404 (si:dkey-166k12.1)
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
108900404
NCBI-ProteinID:
XP_018556946
UniProt:
A0A4W6FQL5
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Position
LG3:6009301..6017579
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AA seq
546 aa
AA seq
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MNFDQILSAIGGFGKYQKILYIWICLPQILLAFHMMVSIFTGATPPHHCRDNSSSAAGNQ
SLLTDTLSLNLSLSDSSCFSSDVLPLGNRTERVPCGHGWVYSKETFQSTTVTEWDLVCDK
AGLNSLGSSIYMFGLLVGSVVFGAMADRYGRRFVLLLSIALQTVFGVAVAFAPNFPVYVI
LRFIVGTTISGVIINAFVLGTEWTCTKRRMLAGIITDYAFGLGYMLLAGVAYLIRDWRKL
QLAISAPGFLLIFYIWVVPQSARWLLANDRREEAIALLRKAALVNGRVLPPVAQVEKCEI
LSGGKRSHTAVDLVRTPQMRKRAIILFYIWFVNVLVYYGLSLGVSRLGTNLYLTQFVFGL
VEIPARSLVLLVLPCSRRFTQTGFLAVGGLACLLMLTVPADHPNVLTGLAMVGKFGIAAS
FAVIYVYTAEIFPTVLRQTGIGVSCMFARMGGVLAPVINMLYNHSPVTPLIIFGTSPLVG
AVLALALPETADRPLPDTVEDVENWDMRSPSDKDNAEMCDGIHQSVSRTEQEQEQEQELQ
HLAGQT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgaccagatcctctctgccatcggaggcttcggcaagtatcagaaaattttg
tacatatggatttgtttaccccagattctcctcgccttccacatgatggtgagcatcttc
accggagccacgccgccgcatcactgccgagacaactcgagctcagcagccgggaatcag
tccctcctcaccgacacgctcagcctgaacttgagcctctcggactcctcctgcttctcc
tccgatgtcctgccgctgggcaaccggaccgagcgcgtcccgtgtggccatggatgggtg
tacagcaaggagactttccagagcaccacagtcaccgagtgggacctggtgtgcgacaaa
gctggactgaacagtcttggttcatctatctacatgtttggcctgttggtgggatctgtg
gtgtttggagccatggctgacaggtacggtcgacgtttcgtcctgctgctgtccatcgct
ctgcagactgtgtttggagtcgctgtggcctttgcacccaacttccctgtctatgtgatt
cttcgctttatagttggcacaaccatatctggagtcatcatcaatgcttttgtacttggc
accgagtggacctgcaccaagagacgcatgctggctggcatcatcacagactatgccttt
ggcctgggctacatgctgttagcaggtgttgcatatctgatacgagactggagaaaactg
caactggctatatcagcccctggcttcctgctcatcttctatatatgggtggttccccag
tctgccagatggctgttagccaacgacaggagagaggaggccatcgcactccttcgcaag
gcagcgcttgttaatggccgagttttacctcctgttgcacaagttgagaagtgtgagatt
ttaagcggagggaagcgaagtcacacggcagtggatctcgtacgaacacctcagatgagg
aagagggctatcatcttgttctacatctggtttgtgaatgtgctggtgtactacggcctc
tcgctcggcgtgtccaggttggggacaaacctctatctgacccagtttgtgtttgggttg
gttgagattccagctcgttctctggtcctactcgtcctgccctgcagccgccgattcacc
cagaccggtttcctggctgttggaggcctcgcctgtctgctaatgctcactgtccctgca
gatcatcccaatgtgctgactggtcttgccatggtggggaagttcggtatagctgcttcc
tttgctgtaatttatgtgtacactgctgagatattccccactgtgctacggcaaacagga
ataggtgtatcctgtatgtttgcaaggatgggtggtgtgttagcacccgtcatcaacatg
ctttataaccacagccccgttactcctctgatcatctttggtacctccccgctggtgggt
gctgtcttggccttggctctgcctgaaactgctgacagacctcttcctgacacagtggag
gacgtagagaactgggatatgaggtcgccttctgacaaggacaatgctgagatgtgtgac
ggtattcaccagtcagtcagcagaacagagcaggagcaggaacaggagcaggagctacaa
catctagcaggccagacttga
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