KEGG   Lates calcarifer (barramundi perch): 108900409
Entry
108900409         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA dimethylallyltransferase
  KO
K00791  tRNA dimethylallyltransferase [EC:2.5.1.75]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lcf01006]
    108900409
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcf03016]
    108900409
Enzymes [BR:lcf01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.75  tRNA dimethylallyltransferase
     108900409
Prenyltransferases [BR:lcf01006]
 Compound prenylation
  tRNA dimethylallyltransferase
   108900409
Transfer RNA biogenesis [BR:lcf03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    108900409
 Prokaryotic type
    108900409
SSDB
Motif
Pfam: IPPT IPT zf-C2H2_jaz zf-met AAA_16 RNA_helicase AAA_33 AAA_22 nSTAND3
Other DBs
NCBI-GeneID: 108900409
NCBI-ProteinID: XP_018556952
UniProt: A0AAJ7QIA5
LinkDB
Position
LG3:complement(6119529..6151958)
AA seq 437 aa
MAASTRSVQCALRRAIAPSLVVILGATGTGKSKLAIEIGKRLRGEIISADSMQVYQGLDI
ITNKVTAEELSQCRHHMISFVDPLVSSYTVVDFRNKALSLIDDMHSRNKLPIIVGGTNYY
IESLLWKVLLDTGQENEELGDGGDGAPHRKLELEKLGGAELHKRLVEVDPKMAAMLHPND
RRKIARSLQIHEETGVPHSHWLEEQRGQDGGNGLGGPLRYPDPCIFWLHADMEALDKRLD
ARVDEMLSAGLIEELRDFHVCYNQQKVQDDSQNYEHGIFQSIGFKEFHDYLTAPESSTQQ
EKDTLRNKGIEAVKIATKRYARKQNKWVRNRFLKRPGDNVPAVYGLDVTDVSRWEETVLN
PALQILGSLSKGEEPTILPIRVQEAGQKNKRNFHTCDLCDKVIIGDLEWTAHLKSKKHHY
HVRKKRRSDPACDPVPE
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggcggcgtccactcgtagcgtgcagtgcgctttgcgtagagcgatagctccgtctttg
gtggtgattttaggagctaccggcaccggcaaatccaagctggcgatcgagatcggaaaa
cggcttcgaggagaaataatcagcgccgactccatgcaggtgtaccagggtctggacatc
atcaccaataaggtgacagctgaggagctctcccagtgcagacatcacatgatcagcttt
gtggacccacttgttagcagctacacggtggtggacttcagaaacaaagccctgtctcta
atagatgacatgcacagcagaaacaaactgccaatcattgttgggggaacaaattattac
attgagtctctgctgtggaaagtcctgctggatacagggcaggaaaatgaagagttaggg
gatggaggagatggggctccacacaggaagttggagctggaaaaacttggaggggctgag
ttacacaaacgactggtggaggtggaccccaaaatggctgccatgttgcaccccaatgac
agacgcaagattgccaggagcctgcaaatccatgaggagacaggtgtccctcatagtcac
tggctggaggagcaaagggggcaggatggaggcaatggactggggggcccactgaggtac
ccagacccctgcatcttctggctacacgctgacatggaggctctagacaagcggttggac
gctcgtgtagatgagatgttgtctgcaggactgatagaggagcttagagacttccatgtc
tgctacaatcagcagaaagtccaggatgacagtcagaactatgaacatgggattttccag
tcgattggttttaaggagtttcatgactatttgactgctcctgaaagcagcacccaacag
gagaaagacacactacgaaacaaaggtatagaagctgtgaagattgctacaaagcgttac
gcccgtaaacagaataaatgggtccgtaaccgctttcttaaacgacctggagacaacgtg
ccagcggtgtatggcctggatgtgacggacgtgtcgaggtgggaggagacggtgctgaac
cctgcactgcagatactgggcagtctcagtaagggtgaggagccgactattctgccaata
agagtacaggaggcggggcagaaaaataaacggaacttccacacgtgtgatctgtgtgac
aaagtgatcattggtgaccttgagtggacagctcacctaaagtctaagaaacatcactat
catgtgagaaagaagaggaggtctgatccagcctgtgatccagtcccagagtag

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