KEGG   Lates calcarifer (barramundi perch): 108900451
Entry
108900451         CDS       T04895                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00310  Lysine degradation
lcf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    108900451 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108900451 (plod1a)
Enzymes [BR:lcf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     108900451 (plod1a)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108900451 (plod1a)
SSDB
Motif
Pfam: GT_PLOD 2OG-FeII_Oxy OGFOD2-like Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 108900451
NCBI-ProteinID: XP_018557007
UniProt: A0AAJ7VJE8
LinkDB
Position
LG6:476219..501350
AA seq 732 aa
MGLWSLLFFPGILICAFSPLMNCEEQRIPEEKLLVMTVATKETDGFRRFLRSAKHFNYTV
KVLGRGQKWRGGDYMSAPGGGQKVRLLKEALQEMEAEDKIILFIDSYDVVFASGPKELLK
KFQQARHKVVFSSESLIWPDRHLEDKHPHVREGNRFLGSGGFIGYLPNIKQMVSDWTGED
NQSDQLFFTKIYIDPVKKKSINITLDSKCRLFQNLHGALDEVVLKFEDGRVRARNVLYDT
LPVIIHGNGPTKLQINYLSNYIPNTWTFETGCTVCHEDLRPLTALKESEYPQVVIGIFIQ
QPTPFVTVFFERLLKLQYPKNKLKLFIYNQEAHHERQINSFMQDHGSLYQAIKFIGPEED
MDVAASRNLGLDMCRKDKDCDYFLNLDIEVVLKNENTLKILIEQNLSIVAPMITRSGRLW
SNFWGALSADGYYARSEDYVDIVQGRRVGVWNVPYVSSVYLVKASLLRSELTDYELFNSH
ILDPDMAYCDNARNKGIFMYVTNMHSFGRILSTENYQTSHLHNDLWQIFENPLDWQERYI
NENYTHIMKDKLIETPCPDVYWFPVFSDVACNHLVEEMEHYGKWSGGNNVDTRIQGGYEN
VPTIDIHMNQINFEKEWHKFLLEYIAPITEKMYPGYYTKAQFDLAFVVRYKPDEQPSLRP
HHDASTFTINIALNQVGLDYQGGGCRFLRYNCSIQAPRKGWALMHPGRLTHYHEGLPTTA
GVRYIAVSFVDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgggactttggtctttgctgttctttccagggattttaatctgtgcattttcccctcta
atgaactgtgaagagcagcgaatccccgaagagaaacttctagttatgacagtagcaacc
aaagagacagatggcttcaggcgtttcttgaggtcagctaaacactttaactacactgtc
aaggttcttggtcggggtcagaaatggagaggaggcgactacatgtcagctccaggagga
ggccagaaagtgcgactcctcaaagaggctctgcaggagatggaggctgaggacaaaatc
atcctttttattgatagctatgatgtggttttcgcctcgggtcccaaagagctgctcaag
aaattccaacaggccagacacaaggtggtgttctcctctgagagcctgatctggcctgac
agacacctggaggacaaacacccccacgtcagggagggcaacaggttcctgggctcaggg
ggtttcattggctaccttcccaacatcaaacaaatggtttctgactggacaggtgaagac
aatcagagtgaccagctgttcttcaccaagatttacattgatccagtaaaaaaaaaatcc
ataaatatcacactggacagcaaatgcagattgttccagaacctccatggagcccttgat
gaggtggtactgaaatttgaggatggccgggtacgagccagaaacgtgctgtatgatact
ctgcctgtcatcatccatggcaatggaccaaccaagctccagatcaactacctgagtaat
tacatccccaacacatggacatttgagactggatgcacagtatgtcatgaggatctccgc
cctctcacagctctcaaggagagtgaatacccgcaggtggtgattggcatctttattcag
cagcctaccccttttgtcacagtgttttttgaacgcctattgaagctccagtatccaaag
aacaagctcaaactcttcatttacaaccaggaagcgcatcatgagcgtcagatcaactct
ttcatgcaggatcatggaagcctttatcaggctatcaaattcattgggcctgaagaggac
atggatgtagctgcctcccgcaacctgggccttgatatgtgccgaaaggacaaggactgt
gactacttcctcaacttggacattgaagtggtcttaaagaatgagaacacactcaaaata
ctcattgaacaaaacctttctattgtagcaccgatgataactcgatctggccgactgtgg
agcaacttctggggagccctcagcgcagacggctattacgccaggtctgaggactacgta
gacatagttcaaggacgcagagtgggtgtgtggaatgtcccgtatgtgtccagtgtgtac
ctggtgaaggccagcctccttcgatcagagctcacagattatgagctgtttaactcacac
atcttagaccctgacatggcctattgtgacaacgcacgcaacaagggaatcttcatgtat
gtaaccaacatgcacagttttggtcgtatcctgtcaacagaaaactatcagaccagccat
cttcataatgatctgtggcagatctttgaaaacccactggattggcaggagcgctacatt
aatgagaactacacccacatcatgaaagacaagctgattgagactccttgtcctgatgtg
tactggttcccagttttctctgatgttgcttgtaaccacctagttgaagaaatggaacac
tatgggaagtggtccggaggaaacaatgtggacaccagaatccaaggcggttatgaaaac
gtccccaccatcgatattcacatgaatcaaatcaactttgaaaaggaatggcataaattc
ttactggagtacatagcaccgatcacagagaaaatgtatcctggttactacaccaaggct
cagtttgacttggcctttgtagttagatataagccagatgagcagccctctttgaggcca
caccatgacgcctcaacattcactataaacattgcactcaatcaagtgggccttgattac
cagggtggtggatgcaggttcctccgctacaactgctccattcaggctcctcgtaaaggc
tgggcccttatgcaccctggtcgcctgacccactaccatgagggcctgccaaccaccgcc
ggtgtccggtacattgcagtgtcctttgtggatccttga

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