Lates calcarifer (barramundi perch): 108900455
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Entry
108900455 CDS
T04895
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108900455 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108900455 (msi2b)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108900455 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
108900455
NCBI-ProteinID:
XP_018557019
UniProt:
A0AAJ7QIP3
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Position
LG21:25835005..26060082
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AA seq
425 aa
AA seq
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MEGDGSQATSGNPTDPQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFITFADAASVDKVLAQPHHELDSKMIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVIEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVTAAAVAAARGSGRGTRGRGGGYTAYGQNAGAGFPDYGLYSAAGASGDV
RGGAPYSLADYGSMGAQAAAQILPSEHASSACNSPTSLQHHLHSPDPFKSPGTNPARPGA
FPGANSPGPVADLYGTASQDSGVGNYISATSPQPGSGFSHSIAVMPSSANHYSIHAVSQG
GGGTR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagccaagccacgtctggaaacccgactgatccgcagcacgacccg
gggaaaatgtttattggtggcctcagctggcaaacttcaccagacagccttagagattat
tttagtaaattcggggaaatcagagaatgtatggtgatgagagacccaacgacaaaacgt
tccaggggctttggcttcatcacttttgcagatgctgccagcgtagataaagtcttggca
cagccgcaccacgagttagactctaaaatgattgaccctaaagttgcctttcctagacgt
gctcagcccaagatggtcacgagaacaaagaaaatatttgtaggaggattatcagccaac
acagtaattgaagatgtgaagcagtattttgaacagtttggcaaggtagaggacgccatg
ctaatgtttgacaaaaccacaaaccgacacagaggttttggctttgtaacatttgaaatt
gaggatgtggtggagaaagtctgcgagatccattttcatgaaatcaataataaaatggta
gaatgcaaaaaggcccagccaaaggaagtgatgtttcctccagggacgcgaggtcgggcc
aggggcctaccatacacaatggatgccttcatgctgggcatgggcatgctgagttatcct
aacattgtagctacatatggcagaggctacactggctttgcaccaagctatagctaccag
ttccctggcttcccagctacagcatacggaccagtgacagcagcggcggtagcagcagct
cgtggctcaggtagggggacccgtggaagaggcggcggctacacggcatacgggcagaac
gcaggggcagggttccctgattatgggttgtattccgcggccggggccagcggtgacgtg
cggggaggagcaccctactccctggctgactatggctcaatgggggcccaggcggctgct
caaatcctgccaagtgagcatgccagctcggcctgcaactctcccacctccctccagcac
cacctgcacagcccggacccttttaagagcccaggaaccaacccagctcggcctggagcc
tttcctggtgccaacagtcctggtcctgtagctgacctctatggaactgccagtcaggac
tctggtgtgggcaactacatcagtgccaccagccctcaaccaggctctggcttcagccac
agcattgctgtgatgccatccagcgctaaccactacagcatccacgcagtgagccagggt
gggggtggtaccagatga
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