Lates calcarifer (barramundi perch): 108900465
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Entry
108900465 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: coiled-coil domain-containing protein 22
KO
K23343
coiled-coil domain-containing protein 22
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108900465
04121 Ubiquitin system [BR:
lcf04121
]
108900465
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Others
108900465
Protein recycling
CCC complex
108900465
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
108900465
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Ortholog
Paralog
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
DUF8567
LYRM2-like
Hemerythrin
PUMA_CC
Cache_WalK
Zw10_N
Motif
Other DBs
NCBI-GeneID:
108900465
NCBI-ProteinID:
XP_018557034
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All DBs
Position
LG6:210530..240045
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AA seq
630 aa
AA seq
DB search
MEEVDKILIHALKQVGTDVSEEIDSVKQFSSELIVEAVVRCIRVIDPSLGSALATSLPPG
MSARFRVGMSLAQACQDIGYKGEIGYQTFLYSSEPEIRALLMCLVEKLPRETTEASDQPT
GKSVALQRAIATAIKAQLAVPWLPINCRLPLYSETQSPGALHSFHVQPLRLPHCTKGPGK
KQLKEVKDYQQDVLLPVTAQTFHHASVVASILEQHTAELSAAQEWDNEWNSQGLLSRLTP
QEYRSRKLTRLQKRIVEQLRSNALPSPESAPGGPRSTSELRELLQAFRGSAPSDHILTKG
THFTHIKKFTFTQDSATVTSSIPSGHQSEGDIQQEELASFKLQFQQLCSDVNQLTADMKH
MSITNTQVLDELKQRVLGNSEKEEKMQVKKKTINLLPDPDNNMLKLQALVEASVKRVVSL
ATQWEKHRAPLINEHRRLKEICSNQDLESSRKLSEIKYLHDKIRVSTEEARKKEEIYKQL
VIELENLPQDVSRSAYTQRILEIVSNIKKQKEEITKILSDTKDLQKEINNLTGKLDRTFA
VTDELVFKDAKKDESVRKAYKYLAALHENCNQLIQTIEDTGTILREIRDLEEQIETENGN
KTVANLERILDDYKAIRQENSVLAAKVREG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgacaaaattttgattcacgccctcaaacaagttggcacggatgtgagt
gaagagattgacagtgtcaaacagttcagcagtgagctcatagtggaggcggtggtcaga
tgcatccgggtgattgatcccagcctgggcagtgcactggccacctcccttcctccaggc
atgtctgcccgcttcagagtgggcatgagcctggcacaggcctgtcaggacattggttat
aaaggagagattggttaccagacttttctgtacagcagtgagccagagatacgcgccctg
ctcatgtgcctagtggagaagctgcctagagagactaccgaagcgtcagaccagccaaca
ggtaaatcagtggccctccagagagccattgctactgcaatcaaagcccagctggctgtc
ccctggctgcctattaactgcagactcccactctacagtgaaacacaaagtccaggagca
ttgcacagcttccatgttcagcccctccgtttaccacactgcactaaagggccaggaaag
aagcaactgaaagaagtaaaggactaccagcaggacgtccttcttcctgtgaccgcgcag
actttccatcatgcatctgtggtggcatccatactggagcagcataccgctgagctgagc
gctgctcaggagtgggacaacgagtggaatagtcagggactcctgtctcgcctcactcca
caggagtaccggtcaaggaaactgacccgactgcaaaaacgcattgtggaacagctgcgt
tctaatgcactgccctctcctgaaagtgcccccggtggtcctcgctcaacctctgaattg
cgtgagctactgcaggccttcagaggctctgccccctctgaccacatcctgaccaagggc
acccacttcactcatataaagaagttcaccttcacacaggactctgcaacagtaaccagc
tccatcccctctgggcatcagtcagagggtgatatccagcaggaggagcttgcttcattc
aagctgcaattccagcagctctgcagtgatgtcaaccaactaacagcagacatgaagcac
atgagtatcactaatacacaggtgttggatgagttgaagcaaagagtactggggaactct
gaaaaagaggagaaaatgcaggttaagaagaaaacaatcaatctgttgccagatccagac
aacaacatgctgaagcttcaggctttggtggaggccagtgtcaagcgggtggtaagcctg
gccactcaatgggagaaacaccgtgctccacttatcaacgagcaccgcagactcaaagaa
atctgcagcaaccaggacctggagtcgtccagaaaactgtctgaaatcaagtatctgcat
gacaaaatccgtgtgtctacagaggaggccagaaagaaggaagaaatatacaaacagctg
gtcatagagttagaaaatcttcctcaggatgtgtctcggtcagcatatactcaaaggatt
ctagagattgtcagcaacatcaagaaacagaaggaggaaattacaaagatactgtcagac
actaaggacctccagaaagagatcaacaacctgacaggaaagctggacagaaccttcgct
gtgactgatgagctggtcttcaaggatgccaaaaaagatgaatctgtccgcaaagcatac
aagtacctggctgctctacatgaaaattgtaatcagttgatccaaaccatcgaggacacg
ggtacaattttgagagagattcgagatctagaggagcagattgagacagaaaacgggaac
aaaactgtggctaacctggagaggattctggatgactacaaggctattcgacaggagaac
tctgtactcgctgccaaagtcagagaaggctga
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