Lates calcarifer (barramundi perch): 108900507
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Entry
108900507 CDS
T04895
Name
(RefSeq) vascular endothelial zinc finger 1 isoform X1
KO
K26610
vascular endothelial zinc finger 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900507
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108900507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-WRNIP1_ubi
DUF7565
zf-C2H2_6
Zap1_zf1
zf-C2H2_jaz
zf-BED
zf_C2H2_13
zf-Di19
DUF5830
Motif
Other DBs
NCBI-GeneID:
108900507
NCBI-ProteinID:
XP_018557115
UniProt:
A0AAJ7VJI4
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Position
LG21:complement(25791168..25808672)
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AA seq
501 aa
AA seq
DB search
MEPSWSTFLFQQANEALHHQHQVAGNSLLPLLNSGTEPPDQKPVLPIPLDQKPPVSAAEL
LKDNVASGTGGGGGGGGPPVAVVKKEPKSKTPFICGYCNKAFRDSYHLRRHESCHTGIKM
VSRPKKTQTAPTMVPLISTVPRENSGNPSYITTVAGILTTATTSTSTGTSIMTPMQHQQQ
QSIPKKPPKPVKKNHGCDMCGKAFRDVYHLNRHKLSHSDEKPFECPICQQRFKRKDRMTY
HVRSHDGGVHKPYICSVCGKGFSRPDHLSCHVKHVHSSERPFKCQVTACTSAFATKDRLR
SHMIRHEGKVTCNICGKMLSAAYITSHLKTHGQASFSNPCNNKGISDWQWNHSGPRKGEL
TVGEILNNSFQVLIDNSHKDANSVHNNSATTTPVTNSAAITSAMNRGVNASNPVTIAAQM
NIATSTVNITSPVNLQHPVTITGPVNLASVNIPTTAHMNIAHPVAITTPMPMNITGPLNI
AMRPMESMPFLSQVLPSSPPW
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagctggagtacgtttttatttcaacaggccaatgaggctctgcatcaccag
caccaagtagccgggaacagcctcttgcctttgctcaattctggaacggagccacctgat
cagaaaccggtgctgcccatccccttggaccagaaaccccccgttagtgctgcagaactt
cttaaagacaatgtggccagtgggactgggggtggtggtggtggtggtgggcctccggtt
gctgtggtcaaaaaggagcctaaatcaaagacacccttcatctgtggctactgcaacaag
gctttccgagacagctaccacctgcggcggcacgagtcttgccacaccggcatcaagatg
gtctcacggcctaagaagacacaaacggcccccaccatggtgccgctcatatccactgta
ccacgtgagaatagcggaaacccttcatacattactactgtagctggtattctaactaca
gccaccacgtcaacatccacaggcactagcatcatgaccccaatgcaacaccaacagcag
cagagcatccctaagaagccccccaagccagtgaaaaagaatcatggctgcgacatgtgt
ggtaaagccttcagagatgtgtatcacctcaaccgccacaagctgtcgcactctgacgag
aagccgtttgagtgtcccatctgccagcagaggttcaagaggaaggatcgcatgacatac
catgtccgctcccatgatggtggagttcacaagccttacatctgttctgtctgtgggaag
ggcttctccaggcctgatcacctaagctgtcatgtcaagcatgtccattcctcagagagg
ccattcaagtgccaagtaacggcctgtacctccgccttcgctaccaaagaccgtctgcgc
tcccacatgatcaggcatgagggcaaagtgacctgcaacatctgtggcaaaatgctaagc
gctgcctacatcacaagtcacctcaagacacacggccaagccagcttcagtaacccatgt
aacaataaaggcataagtgactggcagtggaaccactcagggccacgaaaaggtgagttg
acggtaggagagattttaaataactccttccaagtcctaattgacaactctcacaaagat
gccaacagcgtgcacaacaactcggccaccacaacgccagtcaccaactcggcagccatc
acttcagctatgaaccgtggtgtcaatgccagcaaccctgtcaccattgctgctcagatg
aacatcgccaccagcacggtcaacatcacgtcaccggttaacctgcagcaccctgtcacc
attaccggccctgtgaacctagcctctgtcaacatccctacaacggcacacatgaatatc
gcccacccagttgctatcaccactcccatgcctatgaatatcaccgggccactcaacatt
gccatgaggcccatggagagcatgccttttctatcccaagttctgccttcctcccctccg
tggtag
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