Lates calcarifer (barramundi perch): 108900538
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Entry
108900538 CDS
T04895
Symbol
htr1fa
Name
(RefSeq) 5-hydroxytryptamine receptor 1F
KO
K04153
5-hydroxytryptamine receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108900538 (htr1fa)
04082 Neuroactive ligand signaling
108900538 (htr1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108900538 (htr1fa)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Biogenic amine
Serotonin
108900538 (htr1fa)
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Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
108900538
NCBI-ProteinID:
XP_018557161
UniProt:
A0A4W6FE37
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Position
LG1:complement(13333888..13353704)
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AA seq
398 aa
AA seq
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MDFPNCTEGVFATSSGDYDSLETTKPPPSKILLTLTLSVLAILTTFFNCLVITAIAVTRK
LHHPANYLICSLAVTDLLVAVLVMPFSIIYIQKESWVMGQVVCTIWLSVDITCCTCSILH
LAAIAIDRYRAITDAVEYSRKRTGARAGAMVAVVWLLSILISLPPLLWRHYSRDADHEDQ
CIIIHHHMAFTLYSTLGAFYIPLLLILILYYKIYRAAQTLYMRREASRASRHSCMTNGSM
IPSSYPAGDGDVDGGPRSPEPISPPEKSFSEPSTEEPPRERVRVSVKAFHCKSRRHESRS
ESRRSQFYQGPRISGSRERKAASTLGLIIGAFVICWLPFFVKEVIVNTCSSCSTSVEMAD
FLTWLGYLNSLINPLIYTIFNEDFKKAFQRLVRCSHYL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggatttccccaattgcactgaaggagtatttgccacaagcagtggtgattatgactca
ctggagaccactaaacctcctcccagtaagatcctgcttacgctgaccctgtctgttctg
gctatcctgactacattcttcaactgcctggtgatcacagctatcgcagtaacccgcaag
ttgcaccacccggccaactacctcatctgctcgttggcagtgactgacctgctagttgct
gtgctggtcatgcccttcagtatcatctatatccagaaagagagctgggtcatgggccag
gtggtgtgtaccatctggttaagcgtggatatcacctgttgcacgtgctccatcctgcac
cttgctgcaatcgccatcgaccgttacagagccattactgatgcagtggagtactctcgc
aaacgcacaggggccagggctggtgcaatggtggcagtggtgtggcttttgtccatcctt
atctcacttcctcctctactgtggcggcactacagcagagatgcagaccatgaagaccag
tgcatcatcattcaccatcacatggccttcaccctgtactccacccttggagcattttac
atccccctgctgctcatcctcatcctctactacaaaatctatcgggctgctcagaccctc
tatatgcgcagggaggccagccgagccagccgtcactcatgcatgaccaatgggagcatg
atcccctcctcctaccccgctggagatggtgacgttgatggggggccacgaagtcctgag
cccataagcccaccagaaaagtctttctctgaaccctcaactgaggaacctccgcgcgaa
cgggtacgtgtctcggtgaaggctttccattgcaagtcacgccggcatgagtcacgtagt
gaatcacgtcggagccagttttaccaaggaccacggatctctggctcacgggagcgcaaa
gctgcatccacattggggttgataataggggcttttgtcatctgttggttgccatttttt
gtcaaggaggtgattgtcaacacctgcagttcttgcagtacttcagtggagatggctgac
tttctgacatggttgggatacctcaactcactgatcaaccccctcatttacactatattt
aatgaagacttcaaaaaagcctttcaaagacttgttaggtgtagccattacctatga
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