Lates calcarifer (barramundi perch): 108900546
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Entry
108900546 CDS
T04895
Name
(RefSeq) pituitary-specific positive transcription factor 1
KO
K09363
POU domain transcription factor, class 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108900546
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108900546
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108900546
NCBI-ProteinID:
XP_018557178
UniProt:
A0A4W6FEY5
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Position
LG1:13384812..13398552
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AA seq
375 aa
AA seq
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MACQAFSTDSFTPLAGDSALPILMHHASTSDCLPATSHAHSMVSTVSSGLSLGQTSKRSH
MHLPTSSLSTTLGNSPPSLHYPVTPCHYSNQQATYGMMAAQEMLSASISQTRILQTCGVP
HPNMVSGANPLQGSLTPCLYKFPDHGLNSGSCALSHGFSSLPSVLLSTDEAPGGPSVGEM
KSDTQRKSMRDPDDAPAMDSPQIRELEMFANDFKIRRIKLGYTQTNVGEALAAVHGSEFS
QTTICRFENLQLSFKNACKLKAILTKWLNEAELAGALYNDKIGMNERKRKRRTTISLGAK
EALEHSFVEKSKPSSQEIARIAKGLHLEKEVVRVWFCNRRQREKRVKTSLSLSSCLTKIS
PNCIAQMSKTQRPMT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtcaggcattcagcacagactctttcactccactggcaggagattcagccttg
ccaatcctcatgcatcacgcctctaccagtgactgcctgccggccacctctcatgcacac
agcatggtttcaacagtatcatctgggctgtccctgggtcagacctccaagcgttcccac
atgcacctgcccacctcctccctcagcaccactcttggcaacagtcccccaagcctacat
tacccagtcaccccctgtcactacagcaaccagcaggccacctatggcatgatggcagct
caggagatgctctctgccagcatttctcagactcgtatcctgcagacctgtggtgtccct
caccctaacatggtgagcggtgcaaacccattgcaagggtctcttacaccatgcttgtac
aagtttcctgatcatggtctaaatagtggctcttgtgcattaagccatggtttctcctca
ctgccctcggtcctcctctcaactgatgaggccccggggggccccagtgttggtgagatg
aaaagcgacacccaaaggaagagcatgagggaccctgatgatgcccctgccatggactcc
ccacagattcgagagctggagatgttcgccaatgacttcaagatacggaggatcaaactt
ggctacacccagactaatgtaggcgaggctcttgctgcagtgcatggctcggagttcagc
cagaccacaatctgccgctttgaaaatctgcagctgagctttaagaatgcctgcaaactc
aaggccattctgacaaaatggctgaacgaagctgagctggctggtgccttgtacaacgat
aaaataggaatgaatgaacgaaagagaaaaaggagaacaactatcagcctgggagcgaaa
gaggctctggagcacagctttgtggagaaaagtaagccatcctctcaagaaatagcccgg
atagctaaaggcctccacctggagaaagaggtggtcagagtctggttctgcaaccgacgc
caaagggagaaacgggttaaaacaagcctcagcctcagctcctgtttgaccaaaattagt
ccaaactgcatagcacagatgagtaaaacacaaaggccgatgacgtaa
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