Lates calcarifer (barramundi perch): 108900557
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Entry
108900557 CDS
T04895
Symbol
gtf2f2b
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108900557 (gtf2f2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108900557 (gtf2f2b)
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108900557 (gtf2f2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
108900557
NCBI-ProteinID:
XP_018557195
UniProt:
A0A4W6FGS0
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All DBs
Position
LG1:12625657..12663595
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AA seq
254 aa
AA seq
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MSDKTEVKLTGVKQNQGVWLVKVPKYLSQQWDKATEKGEVGKITIGKKQGKTEVCFSLNA
ELSALGAVGEKDGSLQVPRDHPFTMHTVGGQTMAVFSQSDTDEISLEGMVVHRAECRPVV
NENYMKLKKLQIKESTKPQRLSQQLERAVTTVYKPVANHDFNLEHEQKKKSEGKMVRAER
QVVLDMLFLAFEKYQYYNIKDLVDITKQPVTYLKEIMREIGTYNSKGAHKSTWELKPEYR
HYQSAEEEEQMETA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaacggaggtcaaactaaccggagtcaaacagaaccaaggcgtgtggctt
gtcaaggttcccaaatatttatctcagcaatgggacaaggccacagaaaaaggagaagtt
ggaaagattaccattggaaagaagcaaggcaaaacagaggtatgtttcagcctgaatgca
gagctcagtgccctgggcgctgtgggggagaaggatggatcgctgcaggtcccgagggat
catcccttcactatgcacaccgtgggtggacagaccatggctgtcttcagccagagtgac
acagatgaaatcagtctggagggaatggtggtgcacagagctgaatgcagaccagtcgtc
aacgaaaactacatgaagctgaagaagctgcagattaaagagtccaccaagcctcagcgt
ttgtcacagcagctagagagagccgtcactactgtctacaagcctgtggccaaccacgat
ttcaatttggagcatgagcagaagaagaagtcagaggggaagatggtgagagctgagagg
caggtcgtgttggacatgctctttcttgcctttgagaagtaccagtattacaacattaag
gacctagtggacatcaccaaacaacctgtgacctacctgaaagaaataatgagggaaatt
gggacgtacaacagcaaaggagctcacaaaagcacctgggagctgaagccagagtaccgc
cactaccagtctgctgaggaagaggagcagatggagacggcctag
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