Lates calcarifer (barramundi perch): 108900609
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Entry
108900609 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neurobeachin-like protein 1
KO
K23286
neurobeachin-like protein 1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108900609
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Others
108900609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4800
Beach
NBCH_WD40
DUF4704
PH_BEACH
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
GRAM
Laminin_G_3
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
108900609
NCBI-ProteinID:
XP_018557277
UniProt:
A0AAJ7QJ86
LinkDB
All DBs
Position
LG7_2:10385585..10431056
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AA seq
2760 aa
AA seq
DB search
MASKERLYEVWMLYYTKRDPDYLKLWLEIFISSYERCLDVDFEKPPSRPEEVPPVLTLLP
DNILQVLRHQLLQCVQKASDGLEPEQQNLALLLLKFLIIICRNLSNVEEIGTCSYINHII
TMTTLYIQQLKSKTKEKEMADQSQAEEFVRHALAFCESLYDPYHNWRHRTCGEQLGTVER
SRQKYKAAPLTVEFVPFFYQCFQESEHLKESLKCCLLHLFGAIVAGDQRNALLAISPATM
EVLMRVLADCSMGSCSSDEGEDWDSEAPDRKALLTLGCLREVVQRLLASSSDQRQVEIAS
VLENYFKLLNSDPAAVVASRQQQQQQQAKGRVPTLGRHWESRFVALQVHMLDTIRDMFLC
SDRPVLQAIFLNSNCFEHLTRLLQNSKLVNARCTAADKDQKDITNNRLLTGERDTQVFQG
RLDSLAVATIKALTTVMHKSPAAKEVFKERIGYNHLYEVLISLGQPSRHLLKELMNMAVE
GEHTSVGLLGISNVEPLLLLVQWLPELDSSELQLFTADWLRRLCCLNRQTRATCVNATMV
MRALAALERHQRLHRACAESLLGLVGSLGSQSLSARELLGLLRLLRPPESSQAHPYVGPA
LRALLAMVRKQGLESAMQYFDLSPSMAGIVVPTVQRWPGSAFSFLAWLSLDQDQLGPPSK
DKRKQLYSFFTPGGTGFEAFISSAGVLVVAVCTKKEYVTVMLPDYCFCDSLWHSIGVVHV
PGKRPFGQSLVYIYVDGQQKLSAPLKYPTMTEPFTSCCIGSAGHRTTTPPPSQIPDPPFS
SATTPTTRSSLGGILSPQTWGGLLGGKPESVTKLISAGTQDSEWGSPTSLQGQLGSVMVF
HEPLQPNHIKAICSAGPNCISPFKAQESELGDLSTKLLLHYSPKACRNPICLDLSPNTLH
GRLTGNKVVNWDIKDMINCVGGLPVLSPILEQLALVTPDQHASDPAAGSDFITPDVTTPA
DGDWVILPSNRASEARLEKNLVATFLLVLKHFLQRHPINQENLLHSHVVGTLGALLQKLP
AGHVDVSVLVAVQLLIEQVTYEKNQALLQQLHTHLLFNFNIWNKGDFPLRIGHIQYMSTV
IKDNRKQFRKKYGVQFLLDTIRLYYGKNSNKESDLSEDDIRTIRASLCGLIKYYISKGMS
QEEMHSILGYIAAIGDEDQLCGLLELLLSLLQSSPARDQLFLLLFEPGAADSCYALLLNN
KHSDRLRELVFKLFERMLRCDRVYEKNKQRLRLREAGYSGLSLLFSELHITPTLIRCLLN
QVLHTDQVVNYKDLMSLVQLTHRAGPTVRLIVCKRVYQLLQSQQDAAVQISKQQCWQDTL
MRLYLRGEGSLTLRSADTVSTCSLDLSRPSGSSTNRLELPLERRTRAGSAGRIDRLDDDR
LSIGDTRSVDSLENGDVISLLDTPSSSASTEPQPHIKPWVVGKSGGLTLDLSHLQAYEGV
ESGSQTPGSMPSTPSPLEASKPFPGGSGDREATSSLTEDSFLFSDNISLGESFNNAERAE
EELCSMLLEIVLCVMWRGVEGSDDSAWLERGQVFSALTKLGTANELLLPVDQIKLSLMER
MLEWAVSDNREASAATLPQHTENAVRLLHMVQDFLQAEGLVNPALWTEKVLEETVTLMDS
LMVWYSSGTQWFQLSQVGLRLLLGFMAQEDPEVCAMATAKLNGILQTKEVSSQDEACYLL
GKVEGILRRSIQEQTEETYSFLVPLLRTLLSKVHRLLYMELHLPQLPDTNGSPSFFEDFQ
LYCNSPEWRVYLDKYIIPYMKQYEIETFSQGHETMALYWKECYEAFMVNLHKRERERGES
KIRFQEQFVEPFSRRGRQENLRYNSMLKQQHSQNSATVRQWKAARRGLVCERGPWADRQQ
DEMHWRVSSAENFSRMRLKLVRNYNFDPHREASALRDNLGVHQQRVNPESLLLEAVKQVK
VSDLEDDILELPEDDPAAANNQVEAEEAGQKEKLVLWEDCELVTVVDVVPGRLELTTQHI
YFYDSSQEKEEGVGHDFKWPLSQIREVHLRRYNLRRSALEIFLIDQTNYFLNFKKEARNK
VYSRMLLLRSLSLYGTRSPQELLKASGLTQKWVNREISNFDYLMQLNTIAGRTYNDLAQY
PVFPWILADYTSEELDLTDPRVFRDLSKPVAVLNERNAKAVREKYESFEDPTGTIDRFHY
GTHYSNAAGVMHYLIRVEPFTSLHIQLQSGRFDCADRQFHSIPATWQTLMDNPNDVKELI
PEFFYFPEFLENQNGFDLGRLQISKERVNDVVLPKWAKSPEDFIYKHRKALESEYVSAHL
HEWIDLIFGYKQRGPAAVEALNVFYYCTYEGAVDLDAITDEKERKALEGMISNFGQTPCQ
LLKEPHPVRLSQEEVEKRKAQLDSCPLNMFEHLSDLKSFFVEGISDNVPLVKAVVPKNQS
HSFITQGSPDTMVTVSQNCLVGTHGWLPYNKNISNYFTFIKDPTVSNTKTQRFLSGPFAP
GIEVTAGLFVVSHDGKLLFSGGHWDNSLRVTSLVKGKTVGQHIRHMDIVTCLSTDHCGIH
LMSGSRDTTCMVWQVLQQGGTPVGLHPKPVQVLYGHTDEVVSVSISTELDMAVSGSRDGT
VIIHTVRRGQYMRCLRPPCDSSLPLSILHLAVSWEGHLLVHTCLEGKATLKDKNGLHLYS
VNGKHLCSEPLKEQVTDMCVSGEYVVIGSEQGYLSIRDLYSLSLCAEPMAMRVPVRCVSV
TKEQSHVLVGLEDGKLIIVGVGKPAEMRSGQITRKLWGSSKKLTQISSGETVYNTQHDHN
NT seq
8283 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaggagagactgtatgaagtctggatgctctactacactaagagggatcca
gactacttgaagttatggctggagattttcatcagctcctatgagcgatgcctggatgtg
gactttgaaaagccaccttcaaggccagaggaggttcccccggtgttgaccctcctccca
gacaacatcctgcaggttttgcgccaccagctgctgcagtgcgtccagaaagcctctgat
ggcctggagcctgagcagcaaaacctggctctgctgctactcaagttcctgatcatcatc
tgcaggaacctgtccaacgtggaggagattggcacttgctcttacatcaatcacatcatc
accatgacaacactctatattcagcagctcaagagcaagaccaaagagaaggagatggca
gaccagagccaggctgaggagtttgtccgtcatgcgctggcattctgtgaaagcctctat
gacccttaccataactggaggcatcgaacctgcggggagcagctgggtacagtagagagg
agcagacagaaatacaaggcagctcctctcactgttgagtttgttcccttcttttatcag
tgtttccaggagagcgagcatttaaaggagagtctgaaatgctgcctactgcacctgttt
ggggccatagtagctggtgatcagaggaacgctctgctcgccatctccccagccaccatg
gaggtgttgatgcgggtgctggccgactgctccatgggcagctgctcctcagatgagggc
gaggactgggacagtgaggcccccgaccgcaaggcactgctgactctgggctgcctgcga
gaggtggtgcagcgcctcctggcctccagctccgaccagcggcaagtggaaatcgcctcg
gtgctggaaaattactttaagctgctcaactcagacccagcggctgtggttgcttcccga
cagcagcagcagcagcagcaagcaaagggccgggtgccgacactgggccgacactgggag
agtcgatttgtggcgctgcaagtacacatgctggacactatcagggacatgttcctgtgt
tcagacaggccagttctacaagccatcttcctcaacagtaactgttttgagcatctgaca
cgactgctgcagaacagcaagctggttaatgctaggtgcacggcggcagacaaggaccag
aaagatataaccaacaacaggttactgacaggagagagggacactcaggtgtttcaaggg
cgattagattccctcgctgtagcaaccatcaaagccctgacaacagtgatgcacaaatca
ccagctgcaaaggaggtattcaaggagaggattggttacaatcatctgtatgaggtgctc
atctcactcggccaaccatcacgacatcttctcaaagagctgatgaacatggcggtggag
ggcgagcacacctcagtggggctcctgggcatcagtaatgtggagcccttgctgctgctg
gtccagtggctcccagagctggactcatcggagttgcagctttttacggccgattggctc
cgtcgcctctgctgcctcaatcgccagacccgcgccacctgtgtcaatgccaccatggtg
atgcgagcgctggctgccctggaacgccaccaacgactacatcgagcttgtgctgagagc
ctactggggctggtgggctcactgggctcccagtccttgagtgccagagaactgctgggg
ctcctgcgcctcctcaggcctccagagtccagccaagcacatccctatgtaggtcctgcc
ctgagagccctcctggccatggtacgcaagcaaggcctggagagcgccatgcagtacttc
gacctgtcacccagcatggctggcattgttgttccaacagtgcagcgctggccaggctct
gccttcagcttcctcgcttggttgtcactggatcaggatcagttgggcccccccagcaag
gacaagaggaaacagctctacagttttttcaccccgggagggacggggtttgaggccttc
atcagctcagcgggtgtgctggtggtggctgtatgcacgaagaaggagtatgtcacagtc
atgctgcctgactactgcttctgtgactccctctggcacagcatcggtgtggtgcatgta
ccaggaaagaggccatttggacagagtctcgtctacatttatgttgatggacagcagaaa
ctgtctgcccccctcaagtatcccactatgacagagccattcacttcctgttgcatcggc
tcagcaggccaccgcaccacgactcccccgccctcccagatccccgaccctcccttctcc
tccgccaccacacccaccactcgctcctcactgggtggcatcctgtcaccgcagacttgg
ggaggactgctgggggggaagcctgagtctgtgactaagctcatctctgcagggacacag
gacagcgagtggggaagccccacgtccctgcagggccagctggggagcgtcatggtgttc
catgaacccctgcagcccaatcacataaaagccatctgtagtgctggtccaaactgcatc
tctccattcaaagcccaggagtcagaacttggcgacctttcaaccaaactgctgctgcat
tactcacccaaggcttgtaggaaccccatctgtctagatctgtctccaaacacgctgcat
ggacgcctgactgggaacaaagtcgtcaactgggatatcaaggatatgatcaactgtgtg
ggtgggctgccagtgctgtctcctatactggagcagttggctctggtgacccctgatcaa
catgccagcgatcctgcagctgggtcagatttcatcacccctgatgtgactactccggct
gatggagactgggtcattctcccatccaacagagcttcagaggctcgtctggagaagaat
ctggtggccaccttcctgttggtgcttaagcatttcctgcagaggcatccaatcaaccag
gagaatctgctccactcgcatgttgtcggcacactgggagctctgcttcagaagctgccg
gcgggtcacgtggatgtcagcgtgcttgttgctgtacagctgctgatagagcaggtgacg
tatgagaagaaccaggctctgctacagcagcttcacacacatctgctgttcaacttcaac
atctggaacaaaggagacttcccactacgcattggtcatatccagtacatgtccaccgtc
atcaaagacaacaggaaacagttcaggaaaaaatatggagttcagtttctgttggacacc
atacgcctttactatgggaagaacagtaataaagaaagtgacctgagtgaagatgacatt
cgtaccatccgggcatctctctgtggcctcatcaagtattacatcagtaagggtatgtca
caggaggagatgcatagcattctgggatacattgctgccatcggagacgaggaccagctg
tgtgggctgctggagctgttactcagccttctccagagcagtccagccagggaccaactc
ttcctgctcctctttgagcccggggcagccgactcctgctatgctctcctgctcaataac
aaacactcagaccgactcagagagctcgtctttaagctgtttgagcgcatgttgcgctgt
gaccgtgtctacgagaagaataagcagcgtttgcggctgagagaggcgggttactccggc
ctgtcgctgcttttctctgagctccacatcactccaaccctgatccgctgtctcctcaac
caggtcctccacacagatcaagtggtgaactacaaggacctgatgtctctggtgcagctc
acccaccgggcaggacccaccgttcgcctcatcgtctgcaagagggtgtaccagctgcta
cagtcccagcaggatgctgccgtccagatctcaaagcagcagtgttggcaggacaccctc
atgcgattgtacctgcggggtgaagggtctttgacactgcggagcgccgacaccgtcagc
acctgcagcctggacctgagtcggcccagtggcagcagcactaaccgcttggagctcccg
ctggagaggaggacacgggcaggcagcgccggccgcattgaccgcctggatgatgaccgg
ctcagcataggcgacacacgctctgtggacagcctggagaacggtgacgtcatctcgctg
ctggacacgccgtcgtcctctgcctccactgagccacaaccccacattaagccatgggtg
gtggggaaatcagggggcctgacgctggatctgtcccacctgcaggcctacgagggtgtg
gagagtggcagccaaacacccggcagtatgcctagcactccgtcaccactggaggcttca
aagcctttcccaggaggctctggggatcgagaagcaacttcctccctgactgaagacagc
ttcctcttcagtgacaacatctcactgggggaatcattcaacaatgctgagcgggcagaa
gaggagttgtgcagcatgctgctggagatagtgctgtgtgtgatgtggcgaggcgtagag
ggttcagatgattcggcgtggctggagcgcggccaggtcttctcagctctcaccaaactg
ggaacagccaacgagctgctgcttcctgtcgaccaaatcaaactcagtttgatggaacgt
atgttggaatgggcagtgagcgataaccgcgaggcatcagccgccacattgccacaacac
acggagaatgcagtgcggttgcttcacatggtacaagacttcctgcaggcagagggcctg
gtcaatccagcactgtggacggagaaggtgctggaggagacggtgacgttgatggacagc
ctcatggtgtggtactcctctggcactcagtggttccagctctcccaggttggactgaga
ctgctgctgggcttcatggcccaagaggaccctgaggtgtgtgccatggccactgccaag
ctcaacggcatcctgcagaccaaggaggtgtccagccaggacgaggcctgctacctgctc
gggaaggtggagggcatcctgagacgctccatccaggagcaaacagaggagacctactcc
ttcttggttcctctgctgcgaacgctgctctccaaagtccatcgcctcctctacatggag
ctgcacctcccccagctccctgacaccaacggcagcccgtccttctttgaggacttccag
ctgtactgcaactcacccgagtggcgtgtctacctcgacaaatatattattccgtacatg
aagcagtacgaaatcgaaacattcagccagggccatgagaccatggctctgtactggaag
gaatgctacgaggccttcatggtcaacctgcataagagagagagggagagaggcgagagc
aaaatccgcttccaggagcaatttgtggaacccttttcacgccgaggccgtcaggagaac
ctgcgctacaacagcatgttgaagcagcagcacagccagaacagtgccactgtccggcag
tggaaggcagcacggcggggtctggtgtgtgagagagggccatgggctgacaggcagcag
gatgagatgcactggagggtgtccagtgctgagaacttttcccgcatgaggttgaagctt
gttcgaaattacaactttgaccctcaccgagaggccagcgctctgagagacaacctgggt
gtccatcagcagcgtgtaaacccagagtctctgctgctagaggctgtgaaacaggtcaaa
gtcagcgacctggaagatgacatcttggagctgccggaggacgaccctgccgctgccaac
aaccaggttgaagcagaggaggcaggtcagaaggagaaactggtgctgtgggaggactgt
gagttggtgactgtggtggatgtggtgcccggccgcctggaactcaccacccagcacatc
tacttctatgacagcagccaggagaaagaagaaggagtgggccatgacttcaaatggccc
ctatctcagatccgagaggtccacctgcgacgatataacctgcgtcgctctgctctggag
atcttcctcatcgaccagacaaactacttcctcaacttcaagaaagaggcgaggaacaag
gtctatagccgcatgttgctgctgcgatccctcagcctttatggaacccgctcaccgcag
gagctcctcaaagcctctggactcacacagaaatgggtgaaccgggaaatttccaacttt
gattacttgatgcaactgaacacaattgcaggcagaacgtacaacgacctggctcagtac
ccagtgtttccctggattctagctgactacacttcagaggagctggatctgactgatcct
cgagtattcagggacctgtcaaagccggtggcggtgcttaatgaacgcaatgccaaggct
gttagagagaagtatgaaagtttcgaggacccaacaggcaccatcgacaggttccattat
ggcacccactattcaaacgctgctggggtgatgcactatctgatcagagtggagcccttc
acctccctgcacatccaacttcagagtggacggttcgactgtgcagatcggcagttccac
tccatcccagctacatggcagactctcatggacaaccccaatgatgtcaaagagcttatc
cctgagttcttctacttcccagaattcctagagaaccaaaatggctttgatctgggtcgc
ctgcagatctccaaagaaagggtgaatgatgttgttctgcccaaatgggccaagtcccct
gaggacttcatctacaagcaccgcaaagccctggagtcggagtatgtatcagcacacctt
catgagtggattgatctcatctttggttacaagcagaggggccctgcagcagtggaggcc
ctcaatgtcttctactactgcacatatgagggtgcagtggacctggacgccatcactgat
gaaaaggagcggaaggccttggaaggaatgatcagtaactttggacagacaccctgccag
ttactcaaggagccccatccagtgcgtctgtctcaggaggaagtggagaagaggaaagct
cagctggattcatgtcctctcaacatgttcgaacacctcagtgacctcaagtccttcttt
gttgagggcatcagtgacaatgtgccactggttaaggctgtggtgccaaagaatcagtcc
cattccttcatcacccaggggagccctgacactatggtgacggtgagtcagaactgcctg
gttgggacccatgggtggctgccttacaacaagaatatctccaattacttcaccttcatt
aaggaccccacagtgtccaacaccaagacccagcgtttcctgtcaggaccctttgccccc
ggcattgaagtaactgcagggctgtttgtggtctcccatgatggcaagttgcttttcagc
ggtggccactgggacaacagcctccgggtcacctccctggtcaagggcaagactgtggga
cagcacatccgacacatggacatagtgacctgtttgtcaacagaccactgtggcattcac
ctgatgtccggctccagagacacaacctgcatggtgtggcaggttctgcagcagggtgga
actcctgtgggtctccatcctaaaccagtccaggtgttgtacggacacacagatgaggtg
gttagcgtcagtatcagcacagagctggacatggctgtgtctggatcacgggacgggaca
gtgatcatccacacagtgcgtcggggtcagtacatgcgctgcttacgaccaccctgcgac
agctccctcccgctgtccatcctccaccttgccgtgtcctgggagggtcacctgctggtc
cacacctgcctcgagggcaaagcaacactcaaggataaaaacggccttcatctttactct
gtaaatgggaagcatctgtgcagcgagcctctgaaggagcaggtgactgacatgtgtgtt
tcaggggagtatgtcgtcatcggcagtgagcagggatacctgtccatccgtgacctctat
agtctctctctctgtgcggagcccatggccatgcgggtgccggtgcgttgcgtctccgtc
accaaggagcagagccacgtcctggtgggcctagaggacggcaagctgatcatcgtgggc
gtgggcaagccggcggagatgcgttcgggccagatcacacggaagctgtggggctccagc
aagaagctgacccagatctcttcgggggagacggtctacaacacccagcacgaccacaac
tga
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integrated database retrieval system
