Lates calcarifer (barramundi perch): 108900670
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Entry
108900670 CDS
T04895
Name
(RefSeq) desmoglein-3
KO
K07597
desmoglein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04382
Cornified envelope formation
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108900670
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108900670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108900670
Cell adhesion molecules [BR:
lcf04515
]
Cadherins
Major cadherins
108900670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
108900670
NCBI-ProteinID:
XP_050924415
UniProt:
A0AAJ8DMC4
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MFKISGQHLWEYLGSSAAGVPQLQRYKRDWVIPTRTLKENFDYSTAGYVAKIRSDWDEER
TLYYTLLGHGASKEPVNLFIVEENTGLVRIRGTLDREERETYILTGVARFNNGTVAEGKI
DLRFDVEDENDNPPVFVPVPPATIKESSPAGTLVGMLTATDADKANCSHSQIAYSIKKQE
PSDGTDLFYIDRNTGSIYVKENTLDRETQSSYILTITGSDLNGAPGGNTGTGTIHIKVVD
INDNVPTLEKDQYSGSIVENSAHVEVMRFKVLDADEEKTDNWLAVFDIVTGNEEGTFSIK
TDPNTNEGVLMLEKPVDFEANPDISLGVAVSNVAPSVGGGGSDGGNQGEGDGEGQGVGAG
EGGGDGEGGGEGAGGGDGGTAADLSAGAGGAGAAGAAGAGPGGSAKKPSTKKRPRKGKLY
PVSIAVLNEPEGVTFQPSVKPVSVSENPEENPLMEVIAVYAATDTDTGEPAENVRYAKGY
DPDNWLLIDSETAEIRLQKAPDRESPFLVNGTYYAKILGLTQDMPPKMVTGTVALQVGDV
NDNCPTLTNAVKYICSDTEVVDVTAVDEDGEPNSAPFSFSLVAEKSQGEWRVEPLNDTSA
SLRALRPLWPGHCQVAFIIQDQQGLACPDPQYLDLHVCSCEEGETCKAAGAGGRGAFHKE
SLSSFGWLGVGTLILGLLILLSLLMLTCSCGEVSGIFSELPFDTRESLIVYHTEGRGEDK
DVPQPTSPVQMTPAATIPAIQASNTVSKTRANTTTSFMTLNTANNTYKSRPEAAVKIQES
CFEGSMESQRERYSVDQHLLQYQSMDGISLPDVFLHQYYSQSASRAGEKQSAQDGLLVYD
YEGQGSSASSVGCCSLLESNDDLQFLDDLAPKFKILADICSPPRRPTPLTPKKIVIPQVD
NIDYIVGPSLETKPSSIHGRSPECSQSVSQSSTSLTGLNETFTSSMHRQTPTSLSGFDGA
TFNNMHGQSSHITTNITQSPPVSPVSTAMLPSPGLTLLLQQQPVYYTTTPVLQPMHYVVQ
PQLQSTVLLAEAPVTNRQGMILQNGSSEHSEHMLQGADTHGTLTLSRTRGDRQQCNTETL
MGGHISSRGQRGPHSVQSRQEKYQVDSITFHVLE
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaatatcaggacaacatctatgggagtatttgggaagcagtgcagccggtgtc
ccacagctacaacgctacaagagggactgggttatcccaacaagaacacttaaagaaaac
tttgactacagcacagctggctatgtcgcaaagatcaggtcagactgggatgaagagcga
accctgtactacactctgctgggccacggggccagtaaagaaccagtcaacctttttatt
gtggaggagaacactggactggttcgaatccgaggaacactggaccgagaggagagagag
acttacattcttacaggagtggccagatttaataatggtactgtggctgaaggcaaaata
gacctgaggtttgatgtagaggatgagaatgataatccacctgtgtttgttccagtacct
ccagctacaatcaaagagtccagtccagcagggactttggttggcatgttaacagctaca
gatgcagacaaggccaactgctcccattcacagattgcctacagcattaagaagcaggag
ccctctgatggcacagatcttttctacatagacagaaacacaggatccatctacgtcaaa
gaaaataccttagacagagagacacaaagctcctacattttaacaattacaggaagtgat
ctgaatggagctcctggaggcaacacaggcactgggaccattcatatcaaagtagtggac
atcaatgataatgtgcccacgctggaaaaagaccagtattcaggcagcattgtggagaac
tccgcccatgtggaggtcatgaggtttaaagtgctggatgctgatgaagagaaaactgac
aactggctggctgtttttgacatcgtcactggaaatgaagaggggacattcagcatcaag
actgatcccaacaccaatgaaggtgttctgatgcttgaaaagcctgttgattttgaggca
aatcctgatatcagtcttggagtggcagtatccaatgttgcaccatctgttgggggtgga
ggcagtgatggtgggaatcaaggagagggagatggagaaggacagggggtgggagcagga
gagggaggtggggatggagaaggagggggggagggagcaggaggtggggatggagggact
gcagctgacttgagtgctggagccggtggagctggagctgctggagctgctggagctgga
cctggtggctcagctaaaaaaccttccacaaaaaagaggccaagaaagggcaaactttac
cctgtgagcattgcagttttgaatgagcccgagggggtcaccttccaaccctcagtgaag
cctgtctctgtttctgagaacccagaggaaaatccattaatggaagtcattgctgtctat
gcagccactgacaccgacactggagagcctgcagaaaatgttcgatatgctaaaggatat
gatcctgacaactggctgttgattgactcagagacagcagagattagacttcaaaaggcc
ccagacagagagtccccattcttagtgaatggaacttactacgctaaaatactgggcttg
actcaggacatgcctcccaagatggtcacaggaacagttgcgttgcaggtaggagatgta
aatgataactgccccacactgactaacgccgtgaagtacatctgctcagacacagaagta
gttgatgtcacagcggtggatgaagatggagaaccaaattcagcccctttcagcttcagc
cttgtggcagagaagagccagggggagtggagggttgaacctttaaatgataccagtgcc
tccctcagggctttgagaccgttgtggcctggacactgccaggttgccttcatcatccag
gaccagcagggcctcgcctgcccagaccctcagtacctggatttacatgtgtgctcctgt
gaggaaggagagacctgcaaagcagcaggtgcaggtggtcgaggagcctttcacaaggaa
tccttgtcttcatttgggtggctgggagtggggacactgatcctgggacttctgatactg
ctcagtctcctcatgttgacctgctcatgtggagaagtgtcagggatcttttctgagctt
ccttttgataccagagaatccttgattgtctatcatacagagggcagaggagaggacaag
gatgtccctcagcccacctctccagtccagatgacacctgctgctaccatacctgctata
caggccagcaacacagtatccaaaaccagggcaaacacaacaacttctttcatgactctt
aacactgccaacaacacttacaagtccaggcctgaggctgcggtcaagatccaggagagt
tgctttgaaggctccatggagagccaaagggaaaggtactcagtggatcaacacctgtta
cagtatcaaagcatggatggcatttctctcccagatgtgtttctgcatcagtactactca
cagagtgcaagtcgtgcaggagagaagcagtcagcacaggatggtctgttggtttatgac
tacgagggacaaggttcctctgctagctcagtgggctgctgcagtctcctggagtctaat
gatgacctgcagttcctcgatgaccttgcaccaaagttcaagattctggctgacatctgt
tctcctcctagacgtccaacacctctgacacctaaaaagattgtcatccctcaggtggat
aacattgactacattgttgggccttcattggagactaaaccatctagcatccatggcagg
agcccagagtgtagccaaagtgtcagccagtcatccaccagcctcacaggcctgaacgaa
acattcaccagcagcatgcataggcaaacacccaccagcctcagtggctttgatggagca
actttcaataacatgcatggccagtcttcacacatcaccaccaacatcacacagtcaccc
cctgttagtcccgttagtacagccatgctaccctctcctggcctgacacttctactacaa
cagcagcctgtctactacaccaccacccctgtgctgcagccaatgcattatgtagtccaa
ccacagcttcagagtactgtgctgctggctgaggctcctgtcactaaccggcagggcatg
attttgcaaaacgggagttcagaacacagtgagcacatgctgcagggggcagacactcat
gggactttaaccctcagtcgaacaagaggagacagacagcagtgtaatacagagactctg
atgggtggacacatcagcagcagaggccaaagagggccacatagtgttcagagcagacag
gagaagtatcaggtcgacagcatcacctttcatgtgttagaatag
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integrated database retrieval system