Lates calcarifer (barramundi perch): 108900680
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Entry
108900680 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108900680
Membrane trafficking [BR:
lcf04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108900680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Ig_TRAPPC9-Trs120_1st
SNAP
Motif
Other DBs
NCBI-GeneID:
108900680
NCBI-ProteinID:
XP_050924422
UniProt:
A0AAJ8B121
LinkDB
All DBs
Position
Unknown
AA seq
1461 aa
AA seq
DB search
MAQCVQSVQEFVQDSFVPMVAVLCSEEAERVTRKNNLNFAELLRPFCRLTSEGHIRDPNN
QVQAVKNLRICVNNVVTSPNTVSAALSPAQRRLLNEVVLSCQPQEGAVTSVITAGDYDLN
FSATTPWFEAYRESFLQSMPASDHEFLNHYLACLLVVSSTEAVPVEQFLKLSQEQHRIQH
SGEYTNPKWFIPNTLKYYVLLHDISEGDEQRADTVYEDMKQRYGSQGCYLLKINSRTFST
EDDEQIPDPWSQYLHRNILHNQDILDDLTVNSAAVENSISAAEVDCHHPTEKADGLSNSL
ENHPLQLDTASSPGSLHTASAVNTDLKKGARDSESIAGGAGSHGACLTLNDHDHIRQFIQ
EFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFTATKKWFGGGKGPEKSITEPKSTCGLL
YPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQ
AGAPRPYPAHYMDTAIQTYRDVCKNMVLAERCALLSAEILKSQGKYSEAATLLIKMTSED
SDLRSALLLEQAAHCFINMRNPMVRKFAFHMILAGHRFSKAGQRKHALRCYCQAMQVYKE
RGWSLAEDHINFTIGRQSFTLRQPENAVTAFRQILTNDSRQTATQQGAFLREYLYVYKSV
IGVNEVSLPQLPLPCIHSSATRVYFGHERRLAEGEKQAATHVSLDQEYDQDLAAMWCHLE
EQLVAAANRGIVPANFQPTQCCLNSQTDNLRHPLAVVEEPIIVEVTFRNPLKVSLALSNL
SLLWKFTADDAPPSKEKTAEKLAGEAITNEETLALGVGNMTQKDDIVTTETILDFHLGPE
ETKMARLRLLPHRTGQLNIVGVVYNLAEASSGEMALNSDGQQTVDLMVVRGKQDLMIRGP
RLNQTKEDKMLVRHGPDRRLDPIITPSMPLMEVFFLQFPTALLCGEIRKAYVEFCNVSSV
ALCSLRVASTHPDFFTFGSKATTPLTPLSPTSAENCSAYKTLATTPQPGSVASEILVSAE
DFSQLSSVMEIPIDGNMLQPGKSIQLPLWLRGPDQEGVHEINFLFYYESTQKGNKLSHRV
LRHTVFICASRSLSVQASASRSSVPPHHSLDDKGHGGTLVFIDVENINTSESGVREFHIV
QVSSSSQHWRLHKCINPARDKDCKLTSRERAKLCFRATQCKPLQASSDAVEKYIFADLNL
GNERIISSSTPCGDFFFRCCLTSESQRVDVASSGHPSSSKSQGSVPSEDRASDITSIVKK
CNELDLNIIVIWKAYVVEDNKQLILEGQLHVALQTIGKEATSLTPKEEAQEMVLLKFKSE
LPLPVVLPSAELSQLIKTNLHYPETYTHPFVQDSLCLVPVTLSLSNCSLAQVDVIIDLRH
KSTSPESLEVHNSFTWVGQTQYKLQLKPQEVLCLTLRACFLQAGVYNLNTPRVFAKPAKQ
GAMCETSQQTASPALIIINNA
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgtgttcagtctgttcaggagttcgttcaggactcgtttgtcccgatggtg
gccgtattatgtagtgaagaagcggagagagtgactcgcaagaacaatctgaatttcgct
gagctgctgaggcctttctgcagattaacgtccgaaggtcacatccgggacccaaacaac
caggtgcaggctgtgaaaaatttgcgtatctgtgtcaacaatgtggtgacaagcccaaac
acagtgtctgctgcacttagtcccgcccagcgcaggctgctcaatgaagtggtgttgtcc
tgtcagccacaagagggagctgtcaccagtgtgatcacagcgggagactacgatctcaac
ttcagtgcaaccacaccttggtttgaagcctacagggagagcttcctgcagtcaatgcct
gcctctgaccatgagttcctcaatcactacctcgcctgcctgttggtggtgtcctccact
gaggcagtccctgtggagcagttcctcaagctttcccaggagcagcacaggattcaacac
agtggagaatacactaaccctaagtggtttatccccaacacactcaagtactatgtccta
ctacatgacattagtgagggggatgagcagagggcagatacagtgtatgaggatatgaag
cagaggtatggttctcagggctgctatctgttgaaaataaactctcggaccttctcaact
gaagatgatgaacagattccagacccctggagtcaatacctgcacaggaatattctccat
aaccaggatatacttgatgatctaactgtgaatagcgctgctgttgagaacagtatcagt
gcagctgaagtagactgccatcatccaacagaaaaagcagatggactgtccaacagtcta
gaaaaccatcctctccagctggacacagcgagcagtccggggagcctgcacaccgccagt
gctgtcaacactgacctgaagaaaggtgcaagagattcagagagtatagcgggaggagca
gggagccacggggcatgtctgaccctgaatgaccatgaccacatcaggcagttcatccag
gagtttaccttcagaggtcttctgccacacatagagaagaacatccgacagctcaatgac
cagctggtctccaggaaaggtctgagtcgttccctgttcactgcgaccaagaagtggttc
ggtggaggaaaaggtccagagaagagcatcactgaaccaaagagcacatgtggccttcta
tatcccccagaagcccctgagttgcagatcaggaagatggctgacctgtgcttccttgtt
cagcactacgagctggcctacagctgctatcataccgctaagaaagatttcctgtcagac
caggccatgctgtatgctgcaggagcactggaaatggctgcagtgtcagcctttctgcaa
gctggagctcccagaccgtatccagcacactacatggacactgcaatacagacgtacaga
gatgtctgcaagaacatggtgctggctgagcgatgtgctttactcagtgctgagatactc
aagagccagggaaaatactcagaggctgcaactctgctcattaagatgaccagtgaggac
tcagacctgcgtagtgctttgctgttggaacaggccgcccactgctttattaatatgcgt
aaccccatggtgcgcaagtttgccttccatatgatcttggctggtcatcgtttcagcaaa
gcgggacagaggaagcatgcactgcgctgttactgccaagccatgcaggtgtacaaggag
aggggctggtctttggctgaagaccatatcaacttcacaatcggtcgtcagtcctttaca
cttcgccaaccagagaatgcagtaacagccttcagacagatcctgaccaatgacagcaga
cagacagccacacaacagggagcctttctcagagaatatctctatgtttataagagtgtg
ataggggtaaatgaggtcagtcttccccagctgcctctgccctgcatccacagctcagcc
acaagggtctactttggacatgaacgccgccttgcagaaggggaaaaacaggctgccacc
catgtgtccctagaccaggagtatgaccaggatttggcagccatgtggtgccacctagag
gagcagcttgtggctgctgccaaccgggggattgtcccagcaaacttccagcccacccag
tgctgcctgaacagccagacagacaacttgcggcatccactggctgtggtagaagagcca
atcatagtggaggtgacattcaggaacccgttgaaggtttctctggctctgtccaacctc
tcactcctctggaagttcactgctgatgatgcacctccatcaaaggagaagacggctgaa
aagttggcaggagaggccatcaccaacgaggagactctggctctaggggtgggcaacatg
acacagaaagatgacattgtcacaactgagaccatcctagattttcatttgggtccagag
gaaaccaaaatggcccgactcaggctgctgccacacagaactggacagctgaacattgtc
ggtgtggtgtacaacctggctgaagcctcctctggagagatggctctcaactctgatggc
cagcagacagtggatttgatggtggttcgtggaaaacaggacctgatgatccggggccca
cgactcaaccagaccaaagaggacaaaatgttggttcgacatggtcctgatcggcgtctg
gatcccatcattacaccatctatgcccctgatggaggtgttcttcctacagtttcccact
gctctgctgtgtggtgagatcaggaaggcctacgttgaattctgtaatgtcagcagcgtt
gctctctgcagcctgcgagtggcgtccacacaccccgattttttcacctttggcagcaag
gccactacaccccttacgccgctcagcccgacctcagctgaaaactgctcagcctataaa
actttggccacgaccccccagccaggctcagtggcatctgagattttggtttcagctgag
gatttcagccagctgtccagtgtgatggagatcccaatagatggcaacatgctgcaacca
gggaagtccatccagctgcctctctggctcagaggaccagaccaggagggagtccatgaa
atcaacttcctgttctactatgagagcacacagaaaggaaacaaactcagtcatcgggtg
ttacgtcacacagtgtttatctgtgccagtcgatctctgagtgtgcaggcatcggcctct
cgcagcagtgtccctccacatcacagcctggatgacaaaggccatggtggaacgctggtc
ttcattgatgtggagaacatcaatacgagtgagtctggtgtgcgtgagttccacattgtc
caggtgtccagcagcagtcaacactggcgcctccacaaatgcatcaacccagccagggat
aaagactgtaaactcaccagcagagaaagagccaagctgtgtttcagggccacacaatgc
aagccgctccaagcttcctcggatgctgtagagaaatacatttttgcagacctgaatctg
ggaaatgaacggatcatcagttcctccacaccctgtggagatttcttcttccgttgctgt
ctgacctcagagtctcagcgagtggatgtggcatcatccggacatccatccagtagcaag
agtcaggggtctgtcccatctgaggacagagcctctgacatcaccagcattgtcaagaag
tgtaatgagctggacctcaacataattgtcatttggaaggcctatgtggttgaggacaac
aaacagctgatcctagagggccagctccatgtggcactgcagaccatcggcaaagaggcc
acgtcactgactcccaaagaggaagctcaggagatggtgcttctcaagtttaaatcagag
ctgcctcttccagtcgtcctgccttctgcagagctgtctcagctcatcaaaaccaaccta
cactaccccgagacctacacacatccctttgtccaggatagtctctgcctggtaccagtt
actctgagtctgtccaactgttcgttggctcaagttgatgtcatcattgacttgcggcac
aaaagcaccagcccagagtctctggaggtccacaactcattcacctgggtgggtcagacc
cagtacaagctgcagctgaagcctcaggaagtgctgtgcctgactctacgagcctgtttc
ctccaggcaggagtctacaaccttaacacgccgcgagtttttgcaaaaccggccaagcag
ggagctatgtgtgagacgagtcagcagacagctagccctgctctcattatcatcaacaac
gcctga
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