Lates calcarifer (barramundi perch): 108900728
Help
Entry
108900728 CDS
T04895
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
lcf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108900728
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108900728
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108900728
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108900728
03036 Chromosome and associated proteins [BR:
lcf03036
]
108900728
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108900728
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108900728
SWI/SNF complex
108900728
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108900728
PBAF complex
108900728
SWI/SNF complex
108900728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
108900728
NCBI-ProteinID:
XP_018557429
UniProt:
A0A4W6DST6
LinkDB
All DBs
Position
LG9:complement(22479393..22493625)
Genome browser
AA seq
368 aa
AA seq
DB search
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggcgctaagtaaaacgtttggccagaagccagttaaatttcagttagaacaa
gatggggacttttacatggttgggtcagaggttggaaactatttgcgcatgttcagaggc
tctctgtataaaagatacccatctttatggaggaggttagcctcagtggaggagaggaag
aaaattgtagcctcatcacatgccaccagtgttactctgctgaaggcatcagaatgtgaa
gagatctttgagggtaatgatgagaagtacaaggcagtgtccatcagcacagaacctcct
gcttacctcagggagcaaaaagcaaagaggagcagtcagtgggtccccacgctgcccaac
agctctcaccatctagatgcagtgccttgctccaccaccatcaaccgcaacagaatgggc
cgtgacaagaaaaggaccttcccattgtgctttgatgaccatgaccctgcagtgatccat
gagaatgcagcccaagtagaggcgctggttcccattcgtctagacatggagatagatgga
cagaaactgcgagatgctttcacatggaacatgaatgagaaactgatgaccccagagatg
tttgcagagattttgtgtgatgacctggacctgaatcctctagcctttgtccctgccatt
gcctcagctattcgtcagcagattgagtcgtaccccactgacagcatactagaagagcag
gcagaccagagagtcatcatcaagctgaacatacacgtggggaacatatctttagtggac
cagtttgagtgggacatgtcagagagagagaactccccagaatcctttgcattgaagctg
tgctctgagctaggtctgggtggagagtttgtcaccactatcgcctacagcattcgtggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccactccccacagtagag
attgccatccgcaatacaggtgatgcagaccagtggtgccccctgctggagactctcact
gatgctgaaatggagaagaagatccgagaccaagacaggaacacaaggcgcatgaggaga
ctggccaacactgctccatcctggtag
DBGET
integrated database retrieval system
