KEGG   Lates calcarifer (barramundi perch): 108900731
Entry
108900731         CDS       T04895                                 
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04068  FoxO signaling pathway
lcf04110  Cell cycle
lcf04120  Ubiquitin mediated proteolysis
lcf04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108900731 (skp2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    108900731 (skp2)
   04150 mTOR signaling pathway
    108900731 (skp2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108900731 (skp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108900731 (skp2)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108900731 (skp2)
SSDB
Motif
Pfam: F-box-like F-box LRR_NXF1-5 LRR_At5g56370 LRR_R13L1-DRL21 LRR_4 F-box_5
Other DBs
NCBI-GeneID: 108900731
NCBI-ProteinID: XP_018557436
UniProt: A0A4W6DGC7
LinkDB
Position
LG9:21840665..21846581
AA seq 421 aa
MPTDSVPLQDLPCMSLQGSMLTQSKRINKRKSRGYFSEGLDTECTPTDLIQQHSPRHKHQ
RLISKGKENDCSQFVLARRSRRRKDFTSADISWDHLPDELLLKVLFYLPLQDLLRMSIVC
KRWHRLAFDESLWHSVDLEGLTHMGPALQQVLKTGVRRLRCPRSFMEGLHITDTGPLQMI
QMDLSSSIIPTSALESIISQCRLLEYLSLEGLQLSDTIISSLAKNPNLLQLNLSGCSGFS
APALADMFRSCSRIEQLNISWCEFNSNHVKSVVSNLSSSVTHLNLSGYRESLTLGDVKVL
VVRCPHIQTLDLSDSTLLMADSFPVLAQLKYLQHLSLSRCYHIHLAALTDLGKTFPMLCL
LDVFGLVHDGHLPSLKKGMPHLCINSKPFSAIARPAPANRPMGPLSDRTMWNRRCRLRFK
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgccaacagacagcgtccctctgcaggatcttccctgcatgagtcttcagggctccatg
ttaactcagtccaagaggatcaacaaacgcaaatccagaggctacttcagtgagggcctg
gacacagaatgcacacctacagacctcatccagcagcactcaccccgacacaagcaccag
cggctcatcagcaagggcaaagagaacgactgcagccagtttgtcctggccaggagatca
aggaggaggaaagactttacatcagcagacatttcatgggatcacctaccagatgagctg
ttactcaaggtcctcttctacctccctttgcaggacctcctcaggatgtcaatagtttgc
aagcgctggcaccgcttagcgtttgatgaatctctgtggcacagcgtggatctggagggg
ttgacccatatgggtccagctctgcagcaggttctgaaaacaggggtccgcaggttgcgc
tgccctcgctccttcatggaaggtctgcacatcacagacacaggcccactgcagatgatt
cagatggacctgtccagctccattatccccacctcagcactggagagtataatctctcag
tgcaggctgctggagtatctgagcctggagggtctccagctctctgacaccatcatcagc
tctctggccaagaacccaaacctgctgcagctcaacctgagtggctgctcgggcttctct
gctcctgctctggctgacatgttcagatcctgctccaggatagagcagctgaacatatca
tggtgtgaattcaacagtaaccatgtgaagagtgttgtcagtaatctgagctccagtgtt
actcacctcaacctcagtggttacagagaaagcctcacactaggcgatgtgaaggtgctg
gtggtgagatgtcctcatattcaaactctagatttaagtgacagcactctgctgatggct
gacagcttccctgtcctcgcacaactcaaatatctgcagcatctgtcactgagtcgctgc
tatcacattcacctcgctgctctaactgacctgggtaagactttccccatgctgtgcctc
ctggatgtttttggccttgtacacgatggccacctgccatctctgaagaaggggatgcct
cacctctgcatcaactcaaagcctttctctgccattgcccggccagcacctgccaacaga
cccatgggccccttgagtgaccgcaccatgtggaacaggaggtgtcgactgaggttcaaa
ctgtaa

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