Lates calcarifer (barramundi perch): 108900754
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Entry
108900754 CDS
T04895
Symbol
smyd1a
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1a
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00310
Lysine degradation
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108900754 (smyd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108900754 (smyd1a)
Enzymes [BR:
lcf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108900754 (smyd1a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
108900754 (smyd1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108900754 (smyd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
TPR_10
DUF3369
Motif
Other DBs
NCBI-GeneID:
108900754
NCBI-ProteinID:
XP_018557480
UniProt:
A0AAJ7QJI7
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Position
LG9:21889538..21907400
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AA seq
511 aa
AA seq
DB search
MRTLHSLQHYPSARPTLRRFSSLSVSSVSCLASTMTVGNMESAALFNAGKKGRGLRATKE
LSAGEVVFAEPSFSAVVFDSFTSQVCHSCFRHQAKLHRCAQCKFAHYCDRTCQTACWDEH
KQECGAIKKIGKAPSENIRLAARVLWRIHKDTGIVSDSQLISVDQLEDHVADLPEEDLKQ
LKTDVHNFLEYWSYGRKQHSVDYISHIFGIIKCNGFTLSDQRGLQAVGVGLFPNLCLVNH
DCWPNCTVILNHGNQSALSSALHSQRRIELRALEKIPEGAELTVSYVDFLNLSTDRQKKL
KEHFHFDCTCEHCSQHIKDDLMMAATESEGNKSSADKVKEVTSFSKGCLEKIESSRIQGE
YHEVVKLCRECLAKQENVLADTHLYKLRVLSVASEVLSYLQSFSEAADCARRMVEGYMKL
YHPNNALLGMAIMRAGVTHWHAGEIEMAHGMICKAYGILMVTHGPNHAITRDLESMRTQT
ETELKMFKQNEDVYHTMRDAALKNQPMASKQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagaactctccactccctgcagcattacccctcagcccgtcccaccctcagacgtttt
tcctctctctctgtctcctctgtgtcttgtttggccagtacaatgactgtggggaacatg
gagagtgctgcactctttaatgcagggaagaaaggtcgaggcctcagggctaccaaagag
ctcagcgctggggaagtggtctttgctgagcccagtttctctgctgtcgtctttgacagt
ttcacctctcaggtttgccacagctgttttcggcatcaggccaaactgcatcgctgtgct
cagtgtaagtttgcccactactgtgaccgcacctgccagactgcatgctgggacgaacat
aagcaggagtgtggagccatcaagaagatcggcaaggcacccagtgagaacatccgtctg
gcagctcgcgtgctgtggcgtatacacaaggacacaggcattgtgtcagacagccagctg
atctcagtggaccagctggaagaccacgtagctgacctgcctgaagaagacctcaagcag
ctcaagactgatgtgcacaacttcctggaatactggtcttatggaagaaagcagcactct
gttgactacatctcacacatctttggcataatcaagtgtaatggattcacactgagtgat
cagagaggcctgcaggctgttggtgtgggcctttttcccaacctgtgtctggtcaaccat
gactgctggccaaactgcactgtcatcctcaaccatggcaatcagtcagctctgagttct
gctctccactctcagaggaggattgagttgcgagctttggagaaaatccctgaaggtgcg
gagttgacagtcagctatgtggacttcctcaacctgtccactgatcgccaaaagaagctc
aaggagcatttccactttgattgcacctgcgagcactgcagccagcacataaaggatgac
ctgatgatggctgccacagagagtgaggggaacaaatcttctgctgataaggtgaaagag
gtgacttccttcagtaaagggtgtctggagaagattgagagttcccgcattcagggggaa
taccatgaggtggtgaagttgtgtcgtgagtgtctggcaaagcaggagaacgtcttggct
gacactcacctctataagctacgtgtgctcagtgttgccagtgaggtgctttcatatctg
cagtccttctctgaggctgcagactgtgcccgcaggatggtggaaggatacatgaagttg
taccaccccaacaacgccctgctgggcatggccatcatgcgggcaggtgtcacccactgg
catgctggagagatagagatggcccatggcatgatctgcaaggcctatggcatcctcatg
gtcacccatggacccaaccacgctatcacaagagacctggagtccatgcgcacgcagact
gaaacggagctgaaaatgttcaagcagaatgaggatgtctaccacaccatgagggatgct
gctctgaagaaccagccaatggctagcaagcaatag
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integrated database retrieval system
