Lates calcarifer (barramundi perch): 108900774
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Entry
108900774 CDS
T04895
Name
(RefSeq) peroxisome biogenesis factor 2 isoform X1
KO
K06664
peroxin-2 [EC:
2.3.2.27
2.3.2.36
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108900774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108900774
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108900774
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108900774
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
108900774
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Phage_zn_bind_8
zf-C3HC4_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108900774
NCBI-ProteinID:
XP_018557512
UniProt:
A0A4W6FSI1
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All DBs
Position
LG24:complement(8532873..8540431)
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AA seq
328 aa
AA seq
DB search
MAGLESKQTRTAGSSGPETDVELQTPVLRISQLDALELDSALEQLVWTQFSQCFQNCRPG
LLTPLEPELRAFLQLLLWRFTLYSSSATVGQSLLSLRYHNTLSSSPRYRPLSRRQKLGLA
LLTAGPRWLQERSHNLLLCLGLSSGGPGSQGDSGLLQKGLRSCLTLLSSIAQLTSLINFL
VFLRKGHHPVLAERIAGAQAVFSKPSVARDITYQYMNRELLWHGFAEFLIFLLPLINTRK
LKATVSSIVFGGERADGEGGREAQGVWKECGLCGEWPTMPHTVGCQHVFCYYCIKSHSIA
DTCLTCPKCGAEAGQPEPVKMEVEMIDR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttggaaagcaagcaaacaaggacagctggaagctctggtccagaaactgat
gttgagctgcagacaccagtattgcgcatcagccagctggatgctctcgagttagactca
gcccttgagcagctggtatggacccagttctcccaatgcttccagaactgccgccctggc
ctgctcacccctctggagcctgaactgagggccttcctccagctgctcctgtggaggttc
acactgtattccagcagcgccactgtgggccaatctttactgagcctgcgttaccacaac
actctttcttcctctccccgttatagacctctgtcccgcaggcagaagctgggtctggcc
ctgctcaccgcaggccctcgctggctccaggagcggtcccataacctgctgctgtgttta
ggtttgagttcaggagggcctggttctcaaggagacagtggattgctccaaaagggtctc
cgtagttgcctgaccctcctttccagtattgcccagctcacaagtctcatcaacttcctt
gtgttcctaaggaaaggtcaccatcctgtcctggctgaaaggatcgcgggagctcaagca
gttttcagcaagcccagtgttgcccgggacataacctaccagtacatgaatcgggagctg
ctgtggcacggctttgcagagttcctcatcttcttgttaccactgatcaatacaaggaaa
ctgaaggcaacagtgtcttcaattgtttttgggggagaacgtgctgatggggagggagga
agagaagctcaaggggtgtggaaagagtgcggactgtgcggagagtggccgaccatgcct
catacagtgggctgccaacatgttttctgctactactgcattaaaagccacagcattgca
gacacatgcctcacctgtcccaaatgtggtgcggaggcagggcagcctgagccggtcaag
atggaggtggagatgattgacagatga
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integrated database retrieval system
