Lates calcarifer (barramundi perch): 108900855
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Entry
108900855 CDS
T04895
Name
(RefSeq) Golgi SNAP receptor complex member 2
KO
K08496
golgi SNAP receptor complex member 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108900855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108900855
Membrane trafficking [BR:
lcf04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
108900855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
V-SNARE
Ran-binding
Occludin_ELL
EzrA
PSII
CYP38_PsbQ-like
DUF1690
DUF1664
Motif
Other DBs
NCBI-GeneID:
108900855
NCBI-ProteinID:
XP_018557636
UniProt:
A0A4W6CQ38
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Position
LG11:6133844..6138417
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AA seq
212 aa
AA seq
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METLYHQTNKQIQEVQSMMGNLEKTDRQSVHLVENELQARIDQIFNHLERLEILASKEPP
NRRQNAKLRVDQLKYDVQHLRTALQNFQHRRYAREAQEREREELMSRTFTTNDADTSIPI
DETLQFNSSLHNAHRGMDDLLGSGSSILNGLRDQRSTLKGTHKKMLDVANMLGLSNTVMR
LIERRATQDKFIMIGGMLLTCVFMFLVIRYLG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggagacgctttaccaccagacaaacaagcaaatccaggaggttcagtctatgatggga
aacctggagaagacagaccgtcagtcggtacacttggtagaaaacgagctgcaagcaaga
atcgaccagatcttcaaccatttagaacgcctcgagattctggccagcaaggagccacca
aaccgccgccagaatgccaaattgcgagtggaccagcttaaatacgatgttcaacacctc
cgcaccgctctacaaaacttccagcaccggcgctacgctagagaggcccaggagagagag
agggaggaactcatgagccgcaccttcacaaccaacgacgcagatacctccatccccata
gacgagaccctacagtttaactccagtttgcacaacgcacacagaggcatggatgacctc
ctgggcagtggcagcagcatcctcaacggtctcagagatcaaagatccacattgaagggg
acccataagaagatgctggatgtggccaacatgttggggctgtcgaacacagtgatgaga
ctgatagaaaggcgagccacccaagataagttcatcatgattgggggcatgctgttgacc
tgcgtcttcatgttcctggtcatcagatacctgggctga
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