Lates calcarifer (barramundi perch): 108900880
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Entry
108900880 CDS
T04895
Name
(RefSeq) protein jagged-1b
KO
K06052
jagged-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
lcf04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108900880
04371 Apelin signaling pathway
108900880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108900880
CD molecules [BR:
lcf04090
]
Proteins
108900880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MNNL
EGF
EGF_TEN
hEGF
EGF_DL_JAG
DSL
JAG1-like_EGF2
EGF_Teneurin
EGF_3
EGF_2
EGF_CA
cEGF
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
108900880
NCBI-ProteinID:
XP_018557662
UniProt:
A0AAJ7QJP4
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Position
LG21:complement(13044414..13091116)
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AA seq
753 aa
AA seq
DB search
MESARAHGITRLDPRNASRKITGRQGMRSDRHRGGHLHLQRAVIFLVALAMQPQAVCAAG
MFELQIRHFQNPHGLLQTGDCCDLQASGGQRCSARDQCDTFFQACLKEYQARVASTGTCT
FGSGSTGILGGNSQSLRHRGHDGGGGEDGTNGHIVIPFKYAWPKSFSLVLDALDYDNDTS
DSGQLIERVLLSSMLNPGEQWQTYRHHGRTLSLEYRLRFRCDSNYYGPFCNKLCRARDDF
FGHFSCDSSGSKVCMEGWTGPECKEAVCRQGCHQAHGSCTVPGECKCHYGWKGPLCDQCV
TFPGCVYGSCTEPWQCVCDVNWGGLLCDKDLNFCGTHQPCKNGGTCTNTEPNEYKCECQE
GFRGRNCDIVEHACLSSPCMNGATCVEDPTGFSCICTDGWTGNTCADVVRQCDRSPCGRG
ATCEEAPGGYRCLCPPGWTGRTCQLDTNECETGICAHARYCRNLIGGYLCDCLPGWTGPN
CDIRNSSCQGLCLNGGRCEDQVSGSRCWCPPGFTGKYCQNSPSPCDSAPCLHGGQCTERD
GRTATCNCPAGYSGIFCEIVLDLCNPNPCQQGVACHSTEGRYMCACPEGYYGNECTSLKS
PCIGQHCPGAMSDTTHGGISFYMILVGILALVTVCGCTACAFILSHLHRKRKKQQAVPQE
EGINNQREFVNLIRNVDRPVPLLPPAAPLTQPPAPAPVSRCYEEIELTLPPSPAPSHPSP
ALKPAHAPKLDISNRDREKLNRFHYTDNQELEV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgcaagagcgcacgggataactcggctcgaccccagaaacgcgagcagaaag
atcaccgggaggcaaggcatgaggagtgaccgacaccgggggggacacctccacctgcag
cgggctgtgatttttctcgtcgcgctcgcgatgcagccgcaggctgtctgcgccgcggga
atgttcgagcttcagatccgccacttccagaacccacacggactcctgcagactggagac
tgctgcgacctccaggccagtggggggcagcgctgctctgccagggaccaatgtgacact
ttctttcaagcctgcctcaaggagtaccaggcccgggtcgcctcaaccggaacctgcacc
ttcgggtcgggcagcacagggatcctgggtggaaactcccagtcactccgccaccgggga
catgatggaggaggaggagaggatggcactaatggacacattgtcattcccttcaaatac
gcctggccaaagtccttctctctggtgttggatgctctggactacgacaacgacacatca
gactcaggtcagttaattgagcgagtcctcctctcctccatgttgaaccctggcgaacag
tggcagacgtatcgtcaccacggccggaccctcagcctggagtaccggcttcgcttccgc
tgcgactccaattactatggacctttctgcaacaagctctgccgagcccgcgatgacttc
tttggtcacttcagctgtgactccagcggctcaaaggtctgcatggagggctggaccggg
ccagagtgcaaagaagcggtgtgccggcaggggtgtcatcaggcccacggctcctgcact
gtacctggagaatgcaagtgtcattatggctggaagggtcctctgtgtgaccagtgtgtg
acgttccccggctgtgtgtacgggagctgcaccgagccctggcagtgtgtgtgtgacgtc
aactggggaggactgctgtgtgacaaagatcttaacttctgtggcactcaccagccctgt
aagaacggtgggacctgcaccaacactgagccaaacgagtacaagtgtgaatgccaggaa
ggtttcagagggcgcaactgtgacattgtcgaacacgcgtgtttgtcgtctccatgtatg
aacggagccacctgtgtggaggacccaacgggcttcagctgcatctgtaccgacggctgg
accggaaacacctgcgcagatgtggtgaggcagtgtgatcggagcccttgcggtcgtgga
gcgacgtgtgaggaggctcctggaggttatcggtgtctgtgcccgcctggatggaccggc
aggacgtgccagctggacaccaacgagtgtgaaacgggtatatgcgcccacgcccgctac
tgtcgcaacttgatcggtggatacctgtgtgactgccttcctggatggacggggccaaac
tgtgacatcaggaacagcagctgtcagggtttgtgtttgaacggtggacgctgtgaggac
caggtgtcagggtccagatgctggtgtccacctggtttcactgggaaatactgccaaaac
agtccaagtccctgtgacagcgccccctgtctgcacggaggacagtgcacagagagggat
gggagaacggccacctgcaactgtcccgcgggatattcaggaatcttctgtgagattgtg
ttggacctatgcaaccccaacccctgccagcagggggtagcctgtcacagcacagagggt
aggtacatgtgtgcctgtcccgagggttactatggtaacgagtgcacaagcctcaaaagt
ccctgcattggtcaacactgtccaggtgccatgtcggacacgacacatggaggcatcagc
ttctacatgatcctggtgggcatcttagcattagtgacggtctgcggctgcactgcctgt
gctttcatcctttcccacctccatcgaaagcggaaaaagcagcaggccgtcccacaggaa
gaaggcatcaacaaccagagggagtttgtcaacctcatcagaaacgtggaccgtcccgtg
ccccttcttccccccgctgccccgctcacgcagcctccagcccctgcccctgtctcacgt
tgctacgaggagattgaactgacccttccaccttccccggcaccctcacacccctcgccg
gcgttaaagcctgcccatgctcccaagctggacatttcaaaccgggacagggagaagttg
aaccgcttccactacacagacaaccaggaacttgaggtctga
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