Lates calcarifer (barramundi perch): 108900901
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Entry
108900901 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC108900901
KO
K04613
vomeronasal 2 receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108900901
G protein-coupled receptors [BR:
lcf04030
]
Others
Chemoreception
Vomeronasal pheromone
108900901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
108900901
NCBI-ProteinID:
XP_050921482
UniProt:
A0AAJ8AVJ5
LinkDB
All DBs
Position
LG21:complement(14250089..14265709)
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AA seq
1717 aa
AA seq
DB search
MMTMVFAVEEINRDSRLLPGVKLGYRIMDSCDHVHTSMQALFSLIIENATEDRMERSAQS
DILPSCLAGSPVSAVIGLASSSPTRAVAHTLGPFNIPLVSYFATCTCLTDKHTYPSFLRT
VPSDLFQVKGLVQLVTFLGWLWVGTIGTTDDYSHYGIQAFSSQFRQQGGCVAFHLTIPKS
PTAAEIQEMADRLQSSTTQVVVVFATEGQLLDLLLEGTLGFAFPGVRIPGLKEFLLNVRP
SPTPGMEFVNMFWEELFGCRLQFGGDRSKENAADIPVCTGSEDLSNTESSYTDVSQARIS
YNVYKAVYAIAHALHTLLNCDSAELNMGMCEKHKSFTSRQLLDHLKTVNFTNQFEEKVYF
DSNGEPVPLYDIINWQKNSKGEIRFIKVGSYDGSTPLGQQLQLEQSTIVWTKGQSQVPVS
QCSAPCPSGTRQARRPGEPQCCFDCLPCADGEISNQTGSTECTKCPEFYWSDKDKVNCIA
GIEEFLSFYDTMGIVLVVLTLLGVVLTTIITTVFHRFRSTPIVKANNSEISFLLLLSLKL
CFLCSLLFIGQPSVWTCRLRQAAFGISFVLCLSCLLVKTIVVLLAFQANIPGTRALKLFG
PSQQRSLILAATAPQVCLCAGWLLAAPPFPFKNPTYQASTGKIVVECKEPWPPGFYLVLG
YIGLLAFLCLLLAFLGRKLPDAFNEAKLITFSMLIFWAVWISFIPAYVSSPGKFTVAVEI
FAILASSFGLLLCIFVPKCYIILLRPERNIKKGLVAVKAANTTRVFPRMQEMQSENVMLK
AVWRSMQDQDVGFPMKTREHRKHRVSANRMKKLSSEIFDITELEFSFKPRPNMALWAAKL
IMFLSLFRGTLGSAALDSCVFLGEEEKNSLYEDGDVVIGGLFPLHYSPESSLPTYKTKPT
LTMYNFKSRALRWIQTMTFAIKEINQRSDLLPQLKLGYHIRDSCDDIPVALRELLLLVNG
QPERGSGADSIKKDKDLERNNGSSLGCAAVHRTVSPVIVGDASSGSSVALLRSLGSFHIP
LVSYFASCSCLSDQREFPTFMRTMPSDAFQIRALVQLVTYFGWTWVGVIGVDSDYARFAI
QLFLQESVQYGVCAAYTHLYPVTLSQQALDKLLECYSGTSMASSKVIINFCSESEMQGIL
TEIRRRNITGLQWIASEAWATATLLWEKFGNLLTGTLGFAIQRADVIPGLEEHLTSVRPS
DIHKSTFLAEFWEETFNCRLNGSVNSHFHGVGNYLDRLPCKGTESLDDVYSPYSDVTQLR
VSYNIYKAVYLVAHALQDMSDCKGGKGPFSNGTCADPKHFKPWQLIHYMRRANFSAQGAK
VNFDQNGDPIAYYDLLNWQRSPDGSLHLVKVGFYDASSPAGYSLVINDSVIQWPVGKQAS
RSVCSDSCPPGSRVARRKGEPICCFDCVPCAEGEVSNETDSLECTRCSEDTWPNRARDLC
IPKTIEYLSYHELMGIMLCVVSVLGACISLSILAIFFMYKDTPLVRANNMELSFLLLVFL
AVCFLVGLLFIGEPSDWLCRIRYPTFGISVALCISCLLAKTAVVLMAFRSTLPGSNMMKW
FGPNQQRASVLFGTAVQVIICLIWLLTSPPHANSNTDYHSATIIMECVTGSEVCFWCVLG
YIGILACMCFLMAFLARKLPDNFNEAKFITFSMLIFFAVWITFIPVYVSTAGKYTVAVHI
FAILASAFGLLFCIFAPKCYIIILKPEKNSKKHMMQR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatggtgtttgcagtggaggaaattaaccgtgattcaaggctgttaccaggt
gttaaactgggctaccggatcatggacagctgtgaccatgtccacaccagcatgcaagct
cttttttctttaatcatagaaaatgcaacagaggacaggatggagagaagtgcacaatcc
gacattttgccctcttgtttggctggttctcctgtgtctgctgtgattggtcttgcgtct
tcttcccctacaagagctgtagctcacactcttggtcctttcaacatcccgctggtgagt
tattttgccacatgtacctgtcttactgacaagcatacatacccttcattcttacggact
gtgccaagtgatctctttcaagttaaaggccttgtacagctggtcacttttttaggctgg
ctctgggtgggaacaatagggaccacggatgattacagtcactatggcatccaagcgttc
tctagtcagttcagacagcaaggtgggtgtgtggcatttcatctgactatccccaaatca
cccacagctgctgagatacaagaaatggcagacaggctgcagagttcaaccacacaggtc
gtggtggtttttgccacagagggacagctgctggatctgctcttagagggtacactgggc
ttcgccttccccggagtcagaatccccggtttgaaagagttcctgctgaatgttcgacca
tctcccacaccaggaatggaatttgttaacatgttctgggaggagttatttggctgtagg
ctacagtttggaggagacagatccaaagaaaatgcagcagatattcctgtctgcacaggt
tcagaggatctgagtaacacagaaagcagttataccgatgtatcccaggcaagaatatcc
tataatgtgtacaaagctgtatatgccatcgctcatgctctgcacactttactgaactgt
gattctgcagaacttaacatgggaatgtgtgagaaacataaatcatttacctctagacag
ttgctggatcatctgaagacagtaaattttaccaaccagtttgaggagaaggtatatttt
gactccaacggagagccggtccctctgtatgacatcattaactggcagaagaacagcaag
ggtgaaattaggttcatcaaagtgggaagctatgatgggtcaactccactgggacaacag
ctgcagttggagcaaagcacaattgtatggacaaaaggacagtcacaggtgcctgtatct
cagtgtagtgctccatgcccatctggcaccaggcaggccagacgtccaggagagcctcag
tgttgctttgactgtttgccctgtgcagatggagagatcagcaaccagactggttccact
gagtgcacaaagtgtcctgagttttactggtcagacaaagataaggtgaactgcatcgcc
gggatagaggaatttctgtctttctatgacaccatgggtatcgtcctggtcgtgctcacc
ctactgggtgttgtcctgacaacaatcatcaccactgtctttcaccgtttccgctctaca
cccattgtcaaggccaacaactcagaaataagttttttacttctcctgtcgctcaagctc
tgcttcttgtgttccctgttgttcattggccagccatctgtgtggacatgcaggctccgc
caggcagcatttgggatcagctttgttctctgtctgtcctgcctccttgttaagaccatt
gtagttcttttggcattccaggcgaatatacctggtaccagagctctgaagctgtttggg
ccctcccagcagagatctctgatcctcgcagccacagctcctcaggtttgtctctgtgct
ggttggctgttggccgcacctcccttcccattcaagaacccaacctatcaagcctcaact
ggaaaaattgttgtggagtgtaaggagccatggcctcctggattttacctggtcttgggc
tatattggcctactggcgttcctctgcctcctcctggcattcctcggacgcaagctacct
gatgcgttcaatgaggcaaagctcatcaccttcagcatgttgatcttctgggccgtatgg
atctctttcatcccagcttatgtaagctctcctggcaaattcaccgtggctgtggaaata
tttgcgatactagcctccagttttggactgttactatgtatttttgtgcccaaatgttac
ataattttacttcggcctgaaagaaacattaagaaaggtctggtagcagtgaaagcagcc
aacactaccagagtcttccccagaatgcaagagatgcaaagtgaaaatgtgatgctaaag
gcagtgtggcgcagcatgcaggaccaagatgttggctttccaatgaaaaccagagaacac
aggaaacacagagtcagcgcaaacaggatgaagaagctgagttcagaaatatttgacatc
actgagctggagttttccttcaaacctaggccaaacatggcattgtgggctgcaaagctt
attatgtttctttctctctttaggggcacacttggctcagctgctctggatagctgtgtt
ttcttgggggaagaggagaaaaacagtctatacgaagatggagatgtagttatagggggc
ttattccctctacactacagccctgagtcttctcttccaacatacaaaaccaaaccaact
cttactatgtataatttcaaatctcgtgccttgaggtggattcagaccatgacttttgca
atcaaagagatcaaccagcgcagtgacctcctgccacagctcaagctgggttaccacatc
cgtgacagctgtgatgacatacctgtggctctgagagaactgttgctgttggtaaatggc
caaccagagagagggtcaggagctgatagtattaaaaaagacaaagatctagaaagaaac
aatggttctagcttaggctgtgctgctgtacacaggactgtgtccccagttatcgtagga
gatgctagctctgggagttctgtggctctgctaagaagcctgggttctttccatatccca
ctggtgagctattttgcatcctgcagctgtctgagtgaccaaagggaattccccaccttc
atgcgcacgatgcctagtgatgccttccagatcagagccctggtccagctggttacctac
tttggctggacctgggtgggagtcattggcgtggactctgattatgctcgctttgccatc
cagcttttcctacaggagtcagtgcagtatggtgtatgtgctgcctacactcatctctat
cctgtaactctgagtcagcaggctctagataagcttctggaatgttattcaggtacctcc
atggcatcctcaaaggtcatcattaacttttgcagtgagtcagagatgcagggcattctc
acagaaatcagacgtcggaatataactggcctgcagtggattgccagtgaggcctgggcc
actgccacattgctctgggaaaagtttggaaatctcctgactggaactctaggatttgcc
atccagagagctgatgtgattccagggctggaggaacatctcaccagtgtcagaccctca
gatattcataaatctactttcttagcagaattttgggaagagacgtttaactgtcgattg
aacgggtcagtgaacagccacttccacggggttggcaactaccttgacagattgccatgt
aaagggacagagagtttagatgatgtttactctccttattctgatgtgacacagctacga
gtgtcctataacatctacaaagctgtgtatctggtggcccatgccttgcaagatatgagt
gactgcaaaggtggaaaaggtcctttttctaatggcacctgtgcagatccaaaacatttt
aaaccttggcagctcatccactacatgaggcgtgctaatttttctgcacagggggcaaaa
gtcaattttgatcaaaatggtgaccccattgcttattatgatctcttgaactggcagagg
agtcctgatggctcactgcatttagttaaagtaggtttctatgatgcctcatcgcctgct
ggatacagcctggtcataaatgactcagtgattcagtggcctgtcgggaagcaggcttcc
cggtctgtatgcagtgatagctgtcctccaggttcccgtgttgccaggagaaagggggaa
cccatctgctgttttgactgtgtcccctgtgctgagggagaagttagtaatgagactgat
tctttagagtgcacccgctgctcagaggacacgtggcccaatagagccagagacctctgc
atcccaaagactattgagtacctgtcttatcatgagttaatgggtatcatgctgtgtgtt
gtatctgtactcggagcttgtatttccctctccatccttgccatattcttcatgtataaa
gatacaccactggttcgggccaacaacatggaactgagcttccttctcttggtgttcctt
gctgtctgtttccttgttggtctattgttcattggtgagccttcagactggctttgccgt
atcaggtatccaacatttgggatcagtgttgccctctgcatttcatgcctcctggccaag
acagcagtggtcctaatggctttcaggtccacattgccaggaagtaatatgatgaagtgg
tttggacccaaccagcagagagccagtgtacttttcggaacagctgtacaggtaataata
tgtcttatctggctgctcaccagcccacctcatgccaacagcaacacagattaccacagt
gctaccatcatcatggagtgtgttactggttcagaagtttgcttctggtgtgttcttgga
tacattggcatcctggcctgcatgtgcttcctaatggcttttctggctcgaaagctccct
gataattttaatgaggcaaagttcattaccttcagcatgctgatattctttgcagtgtgg
atcacttttatcccagtttatgtgagcacagctggaaaatacacagtggctgtccatatt
tttgcaattttagcttcagcatttggacttcttttctgcatttttgccccaaagtgctat
atcataattttgaaaccagaaaaaaacagtaagaaacacatgatgcaaaggtga
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