Lates calcarifer (barramundi perch): 108900924
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Entry
108900924 CDS
T04895
Symbol
schip1
Name
(RefSeq) schwannomin-interacting protein 1 isoform X1
KO
K24832
IQ domain-containing protein J
K24833
schwannomin-interacting protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108900924 (schip1)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Other domain-containing proteins
IQ domain-containing proteins
108900924 (schip1)
Others
108900924 (schip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCHIP-1_C
IQCJ-SCHIP1
IQ_SCN5A_C
IQ
FEZ
Motif
Other DBs
NCBI-GeneID:
108900924
NCBI-ProteinID:
XP_018557709
UniProt:
A0A4W6BZU1
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All DBs
Position
LG21:complement(13563122..13756021)
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AA seq
725 aa
AA seq
DB search
MLRNGSYRGTYQGEEARLRSGSLAVARERKHLALCINNQEEVKRYHRYCNHSGGQAAPKV
ERSHPSRSGEEDDNSPHRREQQQHLEFKAIVIQRAWRASLFRRGCWQGQGKNHTGQHQGE
TVPSESLQDPVMTTNISPEQLKSLQSGFKHVNDGGFQLQSNHLTMDLDNNININMPPVEN
KVLIIQRAWRDFLQRQEAEKRSPSPPSLSSSDKMSMSISMTTLSDGSTPDYREDGMDLGS
DASSRSSSESNSNKVTPCSPSLDLATLEDYKSSPSLDLVTLEDYEEDEDYQEYKKKVIEE
WESEYGEDYTSPQPSGQEEGEGGIVGVDSLGKGYRKTVNSRSLAEEFQDVKTVPPLPAPD
GHTATSVAAVPEELKQNGNLILPRSNQLHSPGTPQGGTGTPKPSHRSSSQGRGSRSSGGG
GGGGGGGGGSGGTGVRMGGYREEESVEEEPLPTMDWAALERHLAGLQCREQENQNLNHNQ
NHNMGKTNYTSAQKNERESIRQKLALGSFFDDGPGIYTSCSKSGKPSLSSRLQSGMNLQI
CFVNDSGSDKDSDADDSKTETSLDTPLSPMSKQSSSYSDRDTTEDDSESLEDMDFLSRQK
KLQAEAKLALAMAKPMAKMQVEVEKQNRKKSPVADLLPHMPHISECLMKRSLKPTDLRDM
TLGQLQVIVNDLHSQIESLNEELVQLLLIRDELHMEQDAMLVDIEDLTRHAESQQKHLAE
RTLSK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaacggctcgtacagaggcacgtaccagggagaggaggcgaggctgcgcagc
gggagtctggctgtggctcgagagaggaagcaccttgctctgtgcattaataaccaggaa
gaagtgaagagatatcatcgctactgcaaccacagcggagggcaagcagctcctaaggtg
gagagaagccatccaagtaggagcggggaggaggatgacaatagccctcatcgccgtgag
caacaacagcacctggagttcaaggctattgtgatccagcgtgcctggcgtgcgagtctg
ttccgtagggggtgctggcaggggcaaggcaagaaccacaccggccaacatcagggtgag
acggtgccttcagagagcctccaggaccctgtgatgaccaccaatatttctccggagcag
ctgaagagcctccagagtggcttcaagcatgttaatgatggaggtttccagctgcagagt
aatcatctgaccatggacctagataacaacatcaatatcaacatgccgcctgttgagaac
aaggtgttgattattcagcgggcttggcgtgacttcctccagagacaggaagcggaaaag
aggagcccctccccgccctccctctcctcctccgacaagatgagcatgtcgatcagcatg
acaaccctgtcagatggcagcaccccagattaccgggaggatggcatggacctggggagt
gatgcatccagtcgctccagctcagagtccaactccaacaaggttacgccttgctcccct
tctcttgacctggccacgttggaggactacaaatcctccccctctctggacctggtcacc
ttagaggactatgaggaggacgaggactaccaagagtataagaagaaggtgatagaggag
tgggagagtgagtatggagaggactacacctctccacagccttctggtcaggaggaaggc
gagggaggcattgtgggggttgacagccttgggaaaggctacaggaagacagtgaacagt
cgcagccttgccgaagaattccaggatgtgaagaccgtcccacccctcccggcccccgac
ggacacactgccacctcagtcgcagccgtccccgaggaactgaaacagaacggcaatctg
attttgcccaggagcaaccagctccactcccccggtacaccacaggggggcacagggact
cccaagcccagccaccgcagctccagtcagggcagagggagccgtagcagtggtggaggt
ggtggtggaggaggcggaggaggaggcagtggagggactggggtacggatgggaggatac
agagaggaggagagtgtcgaagaagagcctctgcccaccatggactgggcagccctggag
agacacctggctggtctgcagtgcagagagcaggagaatcagaacctcaaccacaaccag
aaccacaacatgggcaagaccaactacacctcagcccaaaagaatgagagggagtctatc
aggcagaagttggccctgggcagtttctttgacgatgggccgggcatctacaccagctgc
agcaagagcggcaaacccagcctgtcctcacggctgcagagcgggatgaacctacagatt
tgttttgtcaatgacagcggcagcgacaaggacagtgatgcagacgacagcaagacagag
accagtctggacacacctctgtcccccatgtccaagcagagttcatcctactcggacagg
gacaccacagaggatgactcagagtctctggaggacatggacttcctgagtcgacagaag
aagctgcaggcggaggcgaagctggctctggcgatggccaagcccatggccaagatgcaa
gtggaagtggagaaacaaaatcgtaaaaaatcaccagtggctgacctgcttccacacatg
cctcacatcagcgagtgtctaatgaaaagaagcctgaagcccaccgacctgagagacatg
acactgggtcagctccaggttatagtcaatgacctgcactcccagattgaaagtctgaat
gaggaacttgtacaattgctgctgatccgagatgaactacacatggagcaagatgccatg
ctggttgacatagaggacctcaccaggcatgctgagagccagcagaaacatttggctgag
aggaccctatccaaataa
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