KEGG   Lates calcarifer (barramundi perch): 108900980
Entry
108900980         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108900980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108900980
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    108900980
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C BRCT_2 BRCT UBM POLH-Rev1_HhH IMS_HHH LIG3_BRCT PTCB-BRCT HHH_5 DUF7674 Cdd1
Other DBs
NCBI-GeneID: 108900980
NCBI-ProteinID: XP_018557791
UniProt: A0AAJ7VJY4
LinkDB
Position
LG1:complement(20713419..20724887)
AA seq 1397 aa
MSRDGWAKKRANASGDNGWAERGGYMAAKVSKLDEQFKLDAPKEKQKEGICSNIFSGVAI
YVNGYTEPSADELRRLMMLHGGQFHVYYSRSKTTHIIANNLPNSKIQELKGEKVIRPEWI
TESVKAGRLLPYLQYQLYSKQKGPLFPGMTLRQTSEIAGPSRGSLQLTVHQELHLPQRSV
QHSVPNHEHESSSSSQNITNPKPSHHQLYQGNIQPQSIQHSPAACFVSPQPSHLNINPRH
KSPSRTHSLSNPSPSKPQQSTLQTPHRNLQHQGASQLQPQTNSCCRSRPSGCKEVEFKLN
GLLQTSLDVMSHSKMNEECGKEDLSPQVVKEAPLTNGHTHLVNGALKPEDLPPATDEPFV
DKELSECRDKPLSPAVQFQTKSDPYEFPHSPPKQSDQSLVFPPPPTYQEAIKAADTHLLP
KQLQPSLQVDFNPEKTLLSPASRSLSHSPIRLNGSHHNAFSSDPASLNTTNTTAKPDPPP
DTSSSSSKSSAQLLAQTGDLISEFYSRSRLHQISTWRAGFSEYVNELHSKRKVAGGASFP
GKERLRKSVAQCSSDSQGTSAPSSVKSCILHVDMDCFFVSVGIRHRPDLKGKPVAVTSNR
GQGRVPLRPGANPQLEQQYYQRKQTHPQPEWNDEDLHRTPSQESPDSHASGEDQNAAALS
MAEIASCSYEARQAGVRNGMFFGKAKQLCPSLQSVPYDFEAYKEVALTMYETLAGYTHDI
EALSCDEVLIDGSALLAELGINPEDLAKAIRADIKEKTGCCASVGMGSNILLARLATRKA
KPDGQYLLKSEEVDDFIRDLPVTSLPGVGPVMGRKLAAMGVRSCGDLQQVPLSQLQRKFG
PRTGQTLFRFCRGLDDRPVRYEKERKSVSAEMNYNIRFTRIDEAECFLTNLSMEVQKRLQ
EAGLRGRRVTLKVMVRKVGAPLEPAKYGGHGICDNLARTVMLAQSTDSGQLIATAVIKLF
HAMKLQVQDLRGVGIQVQVLEGNHSVPQDSTGQRTRSIKEMLLGQGLSAQSHNRGAADNS
PHQERTLLTPAPSSSSSPHPLFTPEPVPGTSKDLQAYRRTPKHSRARLNFSIEVPSPSQV
DRSVLEALPTELREQVEQSWSLRDGRPNNCRSPSPQASAPLPQPPSLKSCPTSPPRPPAS
GPALYTPTAGTVVLQIPNQPDSLGIVLELPNFSQVDPDVFAALPKELQEELKSAYNRITT
VQPQAKMLEQKNPLLQLKQSGAGIGIGRVKRRYKRKNVVSPIKKGPSPVKRRHTTNSLAK
TITPLITSRDPVNIVKTENGPSTSSSRPDIPESLSKFAPRPAPALAGAYDLKDIKTLLRE
WVTTITEPMEEDILQVVKYCTDLIEDKDLEKLDLIIKYMKRLMQQSLESVWSMAFDFILD
NVQVVVQQAYGSTLKIA
NT seq 4194 nt   +upstreamnt  +downstreamnt
atgagtcgagatgggtgggcaaagaagagagccaatgccagtggtgacaatggttgggct
gaaaggggcggctacatggctgctaaagtctccaagctggatgagcaatttaaacttgat
gcccccaaggaaaaacaaaaggaaggcatatgctccaatatcttcagtggagtggccatt
tatgtcaatggatacacagaaccaagtgcagatgagctacgcagactgatgatgctgcat
ggcggccagttccacgtctactactctcgctccaagaccacccacatcattgccaataac
ttgccaaacagcaaaattcaggagctcaaaggggaaaaggtcatcaggccggagtggatc
acagagagtgtcaaggctgggcgtctcctgccttacctacagtaccagctgtactcaaaa
cagaaaggcccactcttccctggcatgactctgcgccagacctcagagattgcaggaccg
agccgtgggtcgctgcagctgaccgtccatcaggagcttcatctgccgcagcgcagtgtt
cagcactctgttcccaaccatgagcacgagtcctcatccagctcccagaatatcaccaac
cctaagcccagccaccatcagctttaccaaggcaacatccaacctcagtccatccagcac
agccctgcggcttgcttcgtcagtccccaaccgagtcacctcaacataaatcccagacac
aaaagcccttcacgcacccactcgttgtctaacccaagcccctcaaagccccaacagtct
actcttcaaacacctcatcgtaatctccagcaccaaggagccagccaactacaacctcag
accaactcttgttgcagatcccgcccgagtggctgcaaggaagtggaattcaaattaaat
ggattattgcagacctcactggatgtgatgagccattcaaaaatgaacgaagagtgcggc
aaagaggacctttccccacaggtagtgaaggaagcacccctgaccaacggacacactcat
cttgttaatggtgccttaaagccagaggacctccctcctgctacagatgaaccctttgtt
gacaaggaactctctgaatgcagggataaacccttgagtcctgcagtacagtttcagacc
aaatctgacccgtatgagttcccccacagtcctccaaagcaatctgaccagtcccttgtc
tttcctccgccacccacctaccaggaggccataaaagctgccgacacccacctactccca
aaacagctccagccatcccttcaggttgatttcaatcctgaaaagactcttctttcccct
gcatctcgctctctttcacattctccgattcgactgaacggaagtcaccacaatgccttt
tcatctgatcctgcctcactcaacacaaccaacacaacggccaaacccgatcctcccccc
gacacgtcgtcctcatcgtcaaagtcctcagcacagttgctggcgcagacgggtgatttg
atctcagagttctactctcgttcacgtttacaccagatctccacgtggagggccggcttt
tctgagtatgtcaatgaactgcacagcaaacgaaaagtagcagggggtgcctcttttcct
gggaaagagcgactgaggaaatctgtggcccagtgctcttcagacagtcaaggtacatcg
gcaccctcgagtgttaaatcttgtattcttcatgtggacatggactgtttttttgtgtct
gtggggatccgacatcgaccggatctcaaaggaaagcctgtagctgtgaccagtaaccgt
ggacagggcagagtgcccctgagacccggggccaatcctcagctggagcagcagtactac
cagaggaaacaaactcatcctcaaccagagtggaatgatgaggatctacacagaactcct
tcacaagagagtcctgactcccatgccagcggagaggaccagaatgctgctgctctatct
atggcagagattgcatcctgtagctatgaggcaagacaggcgggtgtgaggaacgggatg
ttttttggcaaagcgaaacagttgtgtccctcgctgcagtctgtcccatatgattttgag
gcttataaagaggtagctctcaccatgtacgagactctggctggttatacccatgacatt
gaggccctgagctgtgatgaagtgttgatagacggttctgctctgctagctgagctgggc
atcaacccagaagatcttgccaaagctatcagagcagacatcaaggagaaaacaggatgc
tgtgcttcagtgggcatggggtccaatatcctgttggcccggctggcgacccgaaaggcc
aaaccagatgggcagtacctcttaaagtctgaggaagtggatgattttatcagggacctg
ccagtgaccagcttaccaggtgttggacctgttatgggcagaaagttggctgctatgggt
gtgaggtcatgtggggacctccaacaggtgcctctctctcagctacagaggaagtttggg
cctcggactgggcaaactctgttccgtttttgcagagggctggatgaccggcctgtccgc
tacgagaaggaaagaaagtccgtctcagctgagatgaattacaacattcgcttcacaagg
attgatgaggcagagtgtttcctgactaatctgtccatggaggtgcaaaaacgtttacaa
gaagcagggctacggggtcggagggttacccttaaggtcatggtgcgcaaggtcggagct
ccactggaaccagctaaatacggtggtcacggcatatgtgataatctagcaaggactgtg
atgctcgcgcaatccactgacagtggtcagctgattgccactgcagtcatcaagctgttc
catgccatgaagttgcaggttcaggacctgagaggagtcggcatccaggttcaggttctt
gagggaaatcactcggtcccccaggactccacaggccagcggacacgctccatcaaagag
atgttgctaggccagggactgagtgcccaatcccacaacagaggtgctgcagacaacagc
ccacaccaggaaaggactctcttgaccccagccccatcatccagctcctctccacatcct
ttgttcactcctgagccagtcccagggacaagcaaagacctgcaggcttacagacgaacc
ccaaaacattctcgagcacgtctcaacttcagtattgaagtcccctccccttcgcaggtg
gatcgttccgtgttggaggccctgcccaccgagctgagagaacaagtggagcagtcatgg
tctcttcgggatgggagaccaaacaactgtcgttcacccagtccacaggcctctgctcct
ctcccacagcctccctctctgaagtcttgtccaacttcaccccctcgtcctcctgcctct
gggcctgcactgtacactccaactgcaggaacggtggttcttcagattccaaaccagcca
gacagtctgggaattgttctggaactaccaaacttctcacaggttgatccagacgtattt
gctgcccttcccaaagagctccaggaagaactgaagtctgcctataaccgcataacaact
gtccagcctcaggcaaaaatgttggagcagaagaatccactgttgcagctaaaacagtca
ggagcaggaattggcattggtcgtgtgaagcggcgctacaagagaaaaaatgtggtgagt
cccattaaaaaaggaccttcccctgtgaagaggcgtcacacaacaaacagcctggccaaa
accataacacctcttataacatcacgggacccagtgaacatagtaaagactgaaaatggt
ccctccacatcctcctcaagaccagacatcccagagtctctttctaaattcgctcctcgt
cctgctccagcattagccggagcctatgacctgaaggatattaaaacactcctacgggaa
tgggtcaccaccataacagaacccatggaggaggacattctgcaagtggtgaaatactgc
actgatctgattgaggataaagatctggagaagctggatttgattataaaatacatgaaa
aggctcatgcagcagtcgttggagtctgtttggagtatggcttttgacttcatcctagac
aacgtgcaggtggttgtgcaacaagcttatggtagcaccctgaagatagcatga

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