Lates calcarifer (barramundi perch): 108901003
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Entry
108901003 CDS
T04895
Name
(RefSeq) AF4/FMR2 family member 2 isoform X2
KO
K15195
AF4/FMR2 family member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108901003
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108901003
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
108901003
NCBI-ProteinID:
XP_018557825
UniProt:
A0AAJ7QK13
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Position
LG1:complement(20727862..20743316)
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AA seq
1241 aa
AA seq
DB search
MPTVLGGKGKLSIVCFLLRCAYSQVTRSQHNSCAKDILEDMTQSWPSQQALGGDQAQRIL
YSPKGTKQPTTQHRQSRGDVQLRMTRHPHVAPHKSMLADDLKLSSDDDDTQKASHESSSW
GRHSLSAQRAHTHGRRMRHSSSDSSGSDSSAESGSSSLHSRSPSPEVYPDPVSPANVQPP
CNSKETDRPSAAQWQLDKWLKKSRKKSASSDQDPSQSTTGRLPSSHTQRAPSPARSWDSN
QEYSPSQSPIPSPQFNYSHNNSPLPSPGYSYCPSPSPFPSTCPSPSPSPRHSPIPSPILS
VCPSPFGSPRGSRSPSPVPRDPPRSPSPSLPPSRVRHYPEVQHQNQTQPSLTTDPHRTKI
RPWITPLPNTNSKNKPTNSHPQPTQQHRPKTRPTQVQDQSQSKLKASEVSNQSHGHKSRP
KSNFHPNSKQLSDTPKAKHALHFEQIQGSRSNHSSNHKPRPPFQPSSQHSPTRAKHLVPA
SCETNAGHGTHTQSTSKAAINSGSGSNSRASPSLKPRTKSLEATVPTPVHVNHTKISQKK
PQTKEQEVDRRGDHQSQAEGLRHERKEDRHREKQQGKQERKEDRRLAEEQLLRRPWIQSS
AEEEEEEEEEERVIERQRRREETAKGENRRRREQQHRREWQTAQAKQRLPTNTKRHHPQD
NSHHQGRAKKGGRSEEERDLQPDPSPPSSRSPTPHRPSSSSSTSSSSSSSSDSESEHQAP
VTKVPADSTSHKRLAKRGQQGPGRPDANRPKVVHPRGPTSANPSEGKQGEGKQKLYTLVP
FGRSEQATVPAQRGLRNLVVQIDLCLLKRVPDSTTSSPVKKPSSSPPSSSSAKDKQREAM
KHLYIPETVTKDKRKRKLENGVSPRESKRSLPNAGDLSGRTESSVHAAERNFVTETTHNG
YLEEYLDSKRPLSPLSPLSPLSPLSHSPESTKPPTKTKTSAQHHIHNNKNRDKNRDSAVK
PKMEVECVKVSGQPQPTSESWGPTGHRGTVPHETPHHAEYYLHEAKRMKHRADAMVDKLG
KAVNYVDAALSFMECGKAMEEGPLEAKSPYTMYSETVELIRYAMRLKSHSGPGARQEDKQ
LAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKSSPKVPTTPPSWNDSGKGAGGPPS
SLSPSAKHLRQGSHGGSTSPSLISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKEN
KEFFNYLNTLSGPLTLHSSIAHTVQYTRQALQWIRISAKLN
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgttctcggtggcaaagggaaactttccattgtctgttttctgctccgatgc
gcatattctcaggtaacaagaagccaacacaacagctgtgccaaagatattctggaggac
atgactcagtcctggccgtcccagcaagccttagggggtgaccaggcccaacgaatcctc
tacagccctaagggtacaaaacaaccaactacacaacacaggcaaagtcggggggatgtt
cagctgcgaatgacccgtcaccctcacgtggcacctcacaaatccatgcttgctgacgac
ctgaagctgagcagtgacgatgatgacactcaaaaggccagtcatgagtcatcttcctgg
ggtagacacagcctgtcagcacagagagcacacacacatggcaggcggatgagacattcc
agctcagactcttcaggctcagactccagtgctgagtcgggcagcagcagccttcattcc
cggagcccgagtccagaagtttacccggatcctgtgtcgcctgccaacgtgcagccaccg
tgcaacagcaaggagactgatcgcccttctgctgcccagtggcagttggataaatggctg
aagaagtcgcggaaaaaatctgccagcagtgaccaggatccctcccagagcactacagga
cgcctgccttcttcccacacccagcgtgccccatctccagccaggtcctgggacagtaat
caggaatacagccctagtcaaagccctattcccagcccacagttcaattacagccacaac
aacagccccctgcctagccctggttacagctattgtcctagccccagcccattccccagc
acttgtccgagtcccagccccagcccgaggcacagcccgatcccaagtccgattctaagt
gtttgtcccagtccgtttgggagcccaagaggtagccgcagccctagcccagtacctaga
gaccctccaaggagtccaagtcccagtttacctccttcaagggttcgacactaccctgag
gttcagcatcagaaccaaacacaacctagcctaacaactgatccccacaggacaaaaatt
aggccatggatcaccccgttgcctaacaccaactccaagaacaagcccacaaatagtcat
cctcagccaactcaacagcacagacccaagactcgacccacacaggtccaagaccaaagc
caaagcaaactgaaggcatctgaagtttctaaccagagtcacggccacaaatctagaccc
aagtctaactttcatccaaattctaaacagctctctgacactcccaaagccaaacacgca
ttacattttgagcaaatccagggtagcagatccaaccacagctccaaccacaagcccaga
cctccatttcaacccagctcacaacatagccccacaagagcaaagcacttagttcctgct
agttgtgaaaccaacgctggtcacggtactcatacccaatctacctctaaagctgctatt
aattccggtagtgggtcgaactcgagggccagtcctagcctaaaacctaggaccaagtcg
ttggaggctacagttccaactcctgtgcatgttaatcacacaaaaatatctcagaagaaa
ccccaaactaaggaacaggaggtggaccgcagaggggatcatcagagccaagcagagggg
ctaagacacgaaagaaaagaggacaggcatagggaaaaacagcaaggaaaacaggagaga
aaggaagacaggaggctggcggaggagcagctactgagacgtccctggatccagagttcg
gcggaggaagaggaggaggaagaggaagaagagagagtgatagagaggcagaggcggaga
gaggagacagcaaaaggggaaaacaggaggaggagggagcagcaacacaggcgtgaatgg
caaacagcccaggccaagcagagactgcccactaacaccaagcgacaccaccctcaagac
aactcacaccaccaggggagggcaaaaaagggaggcagaagtgaggaggagagagattta
cagccagacccttcacctccttcgtcacgctccccaactcctcacagaccatcctcctca
tcgtctacttcctcttcctcctcctcaagttcagattcagaatctgaacatcaggctcct
gtcaccaaagttccagcagactccacctcccacaagagactcgccaagcgaggacaacaa
ggcccaggcaggcctgacgccaacaggccgaaggtggtgcaccccagaggacccacctca
gccaatcccagtgaggggaagcagggcgaggggaagcaaaaactctataccctagtccct
tttgggcgaagcgaacaggctacagtgcctgcccagcgagggcttagaaatctggtggtg
cagatagacctctgtcttctcaaaagggtcccggacagcactactagttcccctgttaaa
aaaccttcctcctctcccccctcctcttcatcagccaaggacaaacaacgagaggctatg
aaacacctgtatatacctgagaccgtgacaaaagacaaaaggaaacgcaagctggagaat
ggtgtgtcgcccagagaaagcaagaggagtcttcctaatgcaggtgacctctcaggacgc
acagagtcgtcagttcacgcagccgagcgcaactttgtgactgagaccacacacaatggg
tacttggaggagtacttagacagcaagaggccactgtctccactgtctccactgtctcca
ctgtctccactttcccacagtcccgagtccaccaagcctcccaccaaaacaaagacttca
gcgcagcatcacatccacaataacaagaacagagacaagaatagagattcggctgtgaag
cccaagatggaggtggaatgtgtaaaagtgtcaggacagccccagcccacatctgagtcc
tggggccctacaggtcacagggggaccgtgccacatgaaactccacaccacgctgagtac
tacttacatgaagctaaaaggatgaagcaccgcgctgacgcaatggtggacaagctgggg
aaggctgtaaactatgttgatgctgctctctccttcatggaatgtggaaaagcaatggag
gaaggaccacttgaggcgaaatctccatataccatgtactcagagacagtggagctcatt
aggtatgcaatgaggctgaagagccactctggccctggggcaagacaggaagacaaacag
ctggcggttctgtgtttccgatgccttgccttactttactggcagatgtttcgtttaaag
aaggaccatgccctgaaatactctaaagtgctgctggactattttaagagctcccccaaa
gtgccaactacaccaccctcttggaatgactctgggaagggtgcaggaggacccccgtct
tcgctctcacccagtgccaaacacctcagacagggttcacacgggggcagcacatccccg
tctctcataagcattccccagcgaatccaccagatggcagcaaatcacctgaacatcacc
aacagcgtcctgtacagctacgagtactgggaggtggctgacaacctggcaaaggagaat
aaagaattcttcaattacttgaatactttatctgggccattgactcttcacagtagcatt
gctcatacagtccaatacaccagacaagctcttcagtggatacgcattagtgccaaactt
aactaa
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