Lates calcarifer (barramundi perch): 108901005
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Entry
108901005 CDS
T04895
Name
(RefSeq) junctional adhesion molecule 2b
KO
K06735
junctional adhesion molecule 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108901005
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108901005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcf04090
]
108901005
CD molecules [BR:
lcf04090
]
Proteins
108901005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
Ig_2
Izumo-Ig
Ig_6
Receptor_2B4
Mucin
DAOA
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
108901005
NCBI-ProteinID:
XP_018557828
UniProt:
A0A4W6FFD2
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Position
LG1:20318529..20327464
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AA seq
430 aa
AA seq
DB search
MCCCVSALVVRNLIAKDTVAQPAAVSSLHLLLHPSLVTCGNLTTSLAVELIFPLFALPAV
RRVVSLNFIVRTTGALPPCARSPVSCPACVNAHTHAADETWKKLERVWSKNLNPIRTQSC
GHSQTSGRIRAPETWLNTNTMKMLALPLLITLLHSPVCLSVTVSSSKPKVEVHEHTDAVL
ACEFRTEKDQNPRIEWKKKGKGVTFVYFNHKFTGSYAGRAKIEGATLTIHSVTQKDSGEY
RCEVTASEDHVSLGEATVTLNVLVPPHVPSCEVPNSVFVGSGLELLCKDKLSVPPATYRW
FKDNKALTATADTPYSIDTNKGTLKFKSVSKTDGGMYRCESSNSVGAPKSCVAQQLKVID
YPLNLTILIAGAAGFLILILFCCICVCVCRRRGCCKKEKRTKSTKSYNPPPPPPPTRNLK
HYKQTQSFMI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgttgtgtgtcggcgctggtggtgagaaacctaatagccaaggacacagtagct
cagccagcagctgtttcatctctgcacctcctattacacccatcactggtgacatgtgga
aacctcacaacctcgctggccgtggagctcatattccccctgttcgctctgcctgctgtg
aggagggtggtctccctgaacttcattgtcagaacaacaggggctctcccgccttgtgcg
cgctcccctgtcagttgtccggcgtgcgtgaacgcgcacacgcacgctgcagatgaaact
tggaagaaactggagagagtttggagtaaaaacttaaatcccatccggactcagtcgtgc
ggacactcacagacctcaggacggatccgagctcctgaaacgtggctgaacacgaacacc
atgaagatgttggcgttgcctcttctcatcaccttactgcacagtcctgtctgtctgtct
gtgactgtaagcagcagtaaacccaaagtggaagtgcacgagcacacagatgcagtgctg
gcctgtgaattcaggacagagaaagatcagaaccctcgaattgagtggaagaagaaagga
aagggtgtgacatttgtgtattttaatcacaaatttactgggtcttatgcaggacgagcc
aagatagaaggggcgacgctgacgatacactctgttactcagaaggactcaggggagtac
cgctgtgaggtgactgccagtgaggaccacgtcagcctgggcgaggctactgtaactctc
aatgtgcttgtgccccctcatgtcccatcctgcgaggtgccgaactctgtgtttgtcggc
tcaggccttgagcttctctgtaaggacaaacttagcgtgcctcctgccacctaccgctgg
ttcaaagacaacaaggctctgacagccacagcagacactccatacagcattgacacaaac
aagggcacgctgaagtttaagagtgtgtccaaaacagatggagggatgtaccgctgtgag
tcctccaacagtgtgggggcacccaagagttgtgtggcccaacaactgaaagttattgac
tatcctttgaatttgacaattttgatagcaggtgctgcaggttttctgatactcatcctc
ttctgctgcatctgtgtgtgtgtctgcagacgccgaggctgctgcaagaaggaaaagaga
acaaaaagcaccaagtcctacaaccctcctcctcctcctcctcccacccgtaatctcaag
cactataaacaaactcagtccttcatgatctga
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