Lates calcarifer (barramundi perch): 108901058
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Entry
108901058 CDS
T04895
Symbol
tfdp1a
Name
(RefSeq) transcription factor Dp-1a
KO
K04683
transcription factor Dp-1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03083
Polycomb repressive complex
lcf04110
Cell cycle
lcf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108901058 (tfdp1a)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108901058 (tfdp1a)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108901058 (tfdp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901058 (tfdp1a)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901058 (tfdp1a)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
108901058 (tfdp1a)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
108901058 (tfdp1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
108901058
NCBI-ProteinID:
XP_018557919
UniProt:
A0A4W6FJ89
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Position
LG1:20291364..20300047
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AA seq
413 aa
AA seq
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MAKDAGLIETNGELKVFIDQNLSPSKGVLSLVTVQPTAAPVAKQLLPKTLGPSNVNVTAH
MQHVPHMVIGTPQRPTVSNTILVNSPHTPSSQFLTQSQPSDASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGVTTYNEVADELVAEFSSSDNHMSPNDSHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNRQTEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARNLVPKALEPYVIEMAKGPISNVYITGGSSAN
GARYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDEDEYDENDDED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgctggtctgattgagacaaatggagagctgaaggttttcatcgatcag
aatctgagccccagcaaaggtgtcctgtctttggttactgtacaaccaacagctgcccct
gtggccaaacagctactacccaaaaccttagggccatccaatgtgaacgttactgcacac
atgcaacatgtgccacacatggtgattggaacaccccagaggcctacagtatcaaatacc
attttggtaaacagtccacatacaccaagttcccagttcctcactcagagtcaaccatcc
gatgcctctccttggtcatcaggaaagcgtggtaagaaaggggaaaagaatgggaagggc
ttgaggcatttctccatgaaagtgtgtgagaaggtgcagaagaaaggagtaaccacctac
aacgaggtggcagatgaactggtcgcagaattcagctcttcagacaaccacatgtcaccc
aatgactcacacgtgtatgaccagaagaacattcggcggcgtgtgtatgatgcacttaat
gtgctcatggccatgaacattatctctaaagagaaaaaggaaattaagtggattggcctg
cccaccaactcagcgcaggagtgccaaaacctagaggtggaaagacaaaggcgactggag
aggattaagcagaaacaatcacagcttcaggaactcatactgcagcaaatagcttttaag
aacctggttcagaggaacagacagacagagcagcaggcaaacagacctccacctcctaac
tccatcatccaccttccttttattattgtcaacaccagcaagaaaactgtcatcgactgc
agcatctccaatgacaagttcgagtatttgttcaattttgacagcatgtttgagatccat
gatgacatcgaggttctcaaacgtatgggcatggcctgtggtttggaagtgggaaagtgt
tctccagaggatctgaaggttgcgcgcaacctggtgcccaaagccctggagccctacgtt
atagagatggcaaagggtcccatcagtaatgtctacatcactggaggatcctcagctaat
ggagcccgttaccctgcaagcagtgatggttgcactgacggcaccatggcctccagctcg
aatgactctcactacagtgggtctcgtgtggagactccagtgtcatacatgggggacgat
gacgacgaggatgagtacgacgagaacgacgatgaagactaa
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