Lates calcarifer (barramundi perch): 108901085
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Entry
108901085 CDS
T04895
Name
(RefSeq) UDP-glucuronic acid decarboxylase 1 isoform X1
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00520
Amino sugar and nucleotide sugar metabolism
lcf01100
Metabolic pathways
lcf01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108901085
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
108901085
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
UXS1_N
NAD_binding_4
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
DUF2568
Motif
Other DBs
NCBI-GeneID:
108901085
NCBI-ProteinID:
XP_018557978
UniProt:
A0A4W6FI61
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Position
LG1:20416702..20438286
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AA seq
419 aa
AA seq
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MMKRVIWLLSGLNRRMMKLLFALALIAYIASVWGTFTNMRSIQEHAEMNIEQRIDEAVAP
LREKIRDLEQSFSQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF
FTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTI
GTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEEYWGHVNPIGPRACYDEGKRVAETM
CYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEPLTVYGTGSQTRAFQY
VSDLVNGLVLLMNSNISSPVNLGNPEEHTILEFARLIKSLVVSRSQIQFLPEAQDDPQRR
RPDIRKAKMMLGWEPVVPLEEGLNKTIQYFSRELEHQANNQYIPKPKAARMKKGRPRHN
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgggtcatctggctgttatcaggattaaacagaagaatgatgaaactactt
tttgccctcgctttgatcgcttacattgcctctgtctggggaacatttacgaacatgaga
tcaatacaagaacatgcggagatgaacattgagcagagaattgatgaggctgtggctcct
ctccgagagaagattcgtgatcttgaacaaagtttttctcagaaatacccacctgtcaaa
ttcctgtcagaaaaggatcggaagagaattttgattactggaggtgctggtttcgtgggt
tcccacctgactgacaaactgatgatggatggccatgaggtaactgtggtggacaacttc
ttcacagggaggaaaagaaatgtggaacactggattggccatgaaaactttgagctcatc
aatcatgatgttgtggagccactttatattgaagtggaccaaatctatcacctggcttct
ccggcctctcctcccaactacatgtacaatcccatcaaaactctcaagaccaacaccatt
ggcactcttaacatgcttggtctagccaaacgtgtgggcgccagacttctcctggcttct
acctctgaggtttatggagatccagaggtacacccgcaaaatgaggagtactgggggcat
gtgaaccctattggacctcgagcttgctacgatgaggggaaacgtgtggcagagacaatg
tgttatgcctacatgaaacaggaaggagttgaggtgagagtggcaagaatcttcaacaca
tttggctcccgaatgcacatgaacgatggacgtgttgtcagcaacttcatcctgcaggct
ctgcagggagaacctctcactgtgtatggtacgggttcccaaacaagggcgtttcagtat
gtaagtgatctggtaaatggtctggttttgttgatgaacagtaacatcagcagtccagtc
aatctggggaacccagaggaacacaccatattggagtttgctcgtctcatcaaaagtctt
gttgtgagccggagtcagatccagttccttccggaggctcaagacgacccacagaggaga
agacctgacatccgaaaagccaagatgatgctcggctgggagccagtggtgccgctggag
gaaggcttgaacaaaactatccagtacttcagcagagaacttgagcaccaggccaacaac
caatacatccccaaacctaaagctgcccgcatgaagaaaggacggcccagacacaactga
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