Lates calcarifer (barramundi perch): 108901093
Help
Entry
108901093 CDS
T04895
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108901093
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108901093
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108901093
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108901093
Spliceosome [BR:
lcf03041
]
Common components
Common spliceosomal components
SR proteins
108901093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108901093
NCBI-ProteinID:
XP_018557988
UniProt:
A0A4W6FLI0
LinkDB
All DBs
Position
LG1:19939196..19944614
Genome browser
AA seq
280 aa
AA seq
DB search
MSDNDKGRESRSASRSMSPRGSGKSASRSPAHSPAHSKDGSRHSHSKSRSRSRSKSGSHS
HRGSRRHYSRSRSRSRSYHRRSRSRSYSGERRRRSHSRSPMSNRRRHIGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENTGDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGPSGPRRYSRDYDRGYDRGYDRGG
YDRYDDRDYYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacgacaaaggtcgggagtctcgctctgcatccaggagcatgagtccacgt
ggctcagggaagtcggcaagccgctccccggctcactcgccagcccactcaaaagatggc
tcccgccactcccactccaaatctcggtcccggtccaggtcaaaatctgggtcccattcc
caccgtggttcacgcagacactacagcagatctcgttcccgctcaaggtcctatcatcgc
cgatctcgtagtaggtcttacagcggagagcgacggcgcaggagccacagccgctcaccc
atgtccaatcgccgtaggcacatcggcaaccgtgcgaatccagacccaaactgctgcctg
ggagtgtttggcctgagcttgtacaccacagagagggatctgagggaagtcttctctaaa
tacggccccctggcggacgtctgcattgtgtatgaccagcagtcgaggcgctccaggggc
tttgccttcgtttactttgagaacacaggtgatgctaaagaggcaaaggaacgagccaat
ggcatggagctggatggtcgtaggatcagggtagacttctccatcacaaaaagacctcac
accccaacccccggaatctacatgggccgacccacgtacggtggaggtggtcccagcggt
cctcggcgttattcacgtgactacgaccgtgggtatgatcgcgggtacgacagaggcggc
tatgatcgctatgatgacagggactactacagatcatacagaagacgatctccatcacca
tattacagaggggcttataggtctcgttccagatcacggtcttactctccccgtcgctat
tga
DBGET
integrated database retrieval system
