Lates calcarifer (barramundi perch): 108901113
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Entry
108901113 CDS
T04895
Name
(RefSeq) complement component C6 isoform X1
KO
K03995
complement component 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108901113
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Gene cluster
GFIT
Motif
Pfam:
MACPF
Kazal_C6
EGF_C8A_B_C6
TSP_1
Sushi
TSP1_spondin
Ldl_recept_a
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
108901113
NCBI-ProteinID:
XP_018558010
UniProt:
A0A4W6E4X1
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Position
LG9:2735876..2748062
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AA seq
932 aa
AA seq
DB search
MAPSSRFVLLLQLLGCISAGLACFCDRYPWSSWSTCSRTCNYGTQQRSRNFQKNDGYYHR
SSCAQLCESVDRRSCNEQACPINCLLTEFGPWSDCSPCAKKQFRTRAVQRPSQFGGADCS
PELMEERPCYPSTECKLAPIDCRDDFKCDNGRCINSTLTCNRQNDCGDNSDEKNCVNPTV
VCPAERRVAPGADLVGNGFDAIAEEPRGAVLDNMFMGGSCIIRRPPTTLLYHRVPHNFES
FEIKAGQVEDFSTDPQTVHTDPINVKTSGSGGDNVGIDREHFYFPFALYRNSKTYSHAFE
ASKTTDSKFFRVHQVLPVSKFKVKEPGDVVLSLPFLQFLHALPLEYNYALYRDIFQRFGT
HYYSSGTLGGHYDLLYQYNREELKSSGQTEEHVKGCLNSETTWSIILYTEHSRVSRCSDN
KMTEKYEGSFIKAAEKSFSLVKGGRTREAAALAWERQGPAPDRTSYSNWAKSVLDNPAVV
DYKLKPIIDLVRGIPCAATKRRHLRTALLQYLEEFDTCKCAPCPNNGKPVLSGTECKCVC
QTGTFGTNCEKRAPDFTSEEVDGYWSCWSPWSRCSASMKRHRRRRCDNPAPLRGGQPCKG
ADRQEEPCHISIFARQETCDNDDDFTVGWRNELPPGVQGCLRPQSPDNSFLRKSKQYYNF
GEDEEFQCYTGFDMEGFQYINCLPDGTWSHPSGKCIRKICLPPEIPDEMSLFPDKDEYRV
GESVGLNCNEAGLMPLPQSVYRCGDGLTWEPPLAADLRCSNEQPFVPDGQCAPGQKVQGS
KCVCIQRESCLSQPASLCILNVEVSVTVEMPLCSFHAGRCHGDPLFFVNDGKCDAADAGK
LEWAKFRAKMSSKSSVQEPCDLDTCYEWETCSAAKKCECRAARDCPRVEQHTFCVKLTRT
QRTRSLDLCSMAALKCASYQFEILNEGACESR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctccttccagccgcttcgttctgctgctccagctcctcggctgcatatcagcaggt
ctggcctgtttctgcgatcgatacccatggagctcctggtccacctgctccagaacctgt
aactacggcacacagcagagaagcaggaactttcaaaaaaatgatggttattaccatcgg
agcagctgcgctcagctgtgtgagagtgtcgacaggagaagctgtaacgaacaggcctgt
ccaatcaactgcctgctgacagagttcgggccttggtctgactgttcgccctgcgccaag
aaacagtttcggacccgggccgtgcagaggccgtcccagtttggtggagcagactgcagt
ccggagctgatggaggagaggccctgttacccctccacagagtgcaagttagcacccatc
gactgcagagacgacttcaagtgtgataacggacgctgcatcaactcgacgctgacgtgc
aacagacagaacgactgtggagataactctgatgagaagaactgcgtaaatcctacagtt
gtgtgtccagcagagaggagagtggcccctggggccgacctggtggggaacgggtttgat
gctatagcggaggagccgaggggagcggtgctggacaacatgtttatgggaggaagttgc
atcatcaggaggcctccgaccacgctgctctaccatcgagtacctcacaactttgagagc
tttgagattaaggctgggcaggtggaggacttcagcactgacccccagacagtacacaca
gacccaatcaatgtgaagacgtctggttcgggcggagacaacgtcggaatagacagagag
catttttacttccccttcgctctctacaggaactctaagacatacagtcacgcttttgaa
gcttcaaagacaacggactccaagtttttccgggtgcaccaggttcttcccgtgtccaag
ttcaaggtgaaagaaccgggtgacgtcgtcctgtcgctgcctttcctccagttccttcac
gctcttcctctcgagtacaactacgccctctacagggacatcttccagcgcttcgggacg
cactactacagctcggggacgctgggaggccactacgacctgctgtaccagtacaaccga
gaggaactcaagagttcaggtcaaacagaagagcacgtcaaaggttgcctgaacagcgaa
accacctggtccatcatcctctacaccgaacacagcagggtgtcccggtgctctgacaac
aagatgactgagaaatatgaaggctcgttcattaaggcagcagagaagtctttctccctg
gtgaaaggaggaagaaccagagaggcagcagctctggcctgggagaggcagggccccgct
ccggaccggacatcctacagtaactgggccaagtcggtcctggacaaccctgctgtggtc
gattacaagctaaagccgatcatagatctggttcgggggatcccctgcgcggccacaaag
aggcgacacctgaggacggccctcctgcagtacctggaggaatttgacacctgcaagtgt
gctccctgtcccaacaacggcaaaccagttctgtctggcacagaatgcaagtgcgtctgc
cagaccggcaccttcggcaccaactgtgagaaacgggctcctgacttcacctcagaggag
gtggatggttactggagctgctggagcccatggagtcgctgttcagcctccatgaagaga
catcggaggaggcggtgtgataaccccgctcccctcagaggaggccaaccctgcaaaggt
gccgacagacaggaggagccatgtcacatctccatctttgcaagacaggagacgtgcgac
aatgacgacgacttcactgtgggctggaggaacgagctgcctcctggtgtgcagggctgt
ctgcggccacagagccccgacaacagcttcctcaggaaatcaaagcagtattacaacttt
ggtgaggacgaggagttccagtgctacactgggtttgacatggagggttttcagtacatc
aactgtcttcctgatggaacctggagtcatccaagtggaaaatgcatcagaaagatctgt
cttcctcccgagatccctgacgagatgtcgctgttccccgacaaagacgagtacagagtg
ggggagtcggtgggtttgaactgtaacgaggcgggcctgatgccgctgccgcagagtgtc
tacaggtgcggtgacggtctcacctgggagcctccgttagctgctgacctccgctgctcc
aacgaacagccatttgttcctgatggtcagtgtgctccaggacagaaggtacagggctct
aaatgtgtctgcatccaacgggagagctgcctttcacaaccagcgagtctctgcatcctg
aacgtagaggtcagtgtcactgtggagatgcccctctgctccttccacgctggtcgctgc
cacggcgacccgctcttcttcgtcaatgatggtaagtgtgacgcagccgacgcagggaaa
ctggagtgggccaagttcagagccaaaatgtcttccaagagctccgtgcaggagccctgt
gacctcgacacctgctacgaatgggagacctgctctgcggctaagaagtgtgagtgccga
gctgctcgggactgccccagagttgaacagcacacgttctgcgtgaagctgaccaggacc
cagaggactcggagtctggacctttgctccatggccgctctcaaatgtgccagctatcag
tttgagattctcaatgaaggcgcgtgtgagtccagatga
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