Lates calcarifer (barramundi perch): 108901117
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Entry
108901117 CDS
T04895
Symbol
htr1ab
Name
(RefSeq) 5-hydroxytryptamine receptor 1A-beta
KO
K04153
5-hydroxytryptamine receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108901117 (htr1ab)
04082 Neuroactive ligand signaling
108901117 (htr1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108901117 (htr1ab)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Biogenic amine
Serotonin
108901117 (htr1ab)
SSDB
Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-GeneID:
108901117
NCBI-ProteinID:
XP_018558021
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Position
LG9:complement(2724488..2726015)
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AA seq
416 aa
AA seq
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MEGANNTTAWAQFDNLSIKTPKPEDEEVKLSYQVVTSFLLGALILCAIFGNACVVAAIAL
ERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNRWTLGQVPCDIFISLDVLCCTSS
ILHLCAIALDRYWAITEPIDYMKKRTPRRAAVLISVTWLVGFSISVPPMLIMRSQPNSLA
EDRANPKQCKIRQDPWYTIYSTFGAFYIPLTLMLVLYGRIFKAARFRIRRTVRKTEKKKV
SDSCLALSPALFHKKTHGDAQGKSWKRSVEPRPLPSVNGAVKHAEDGESLEIIEVHSNSK
GNLPLPNTPSSVPLFESRHEKATEAKRKIALARERKTVKTLGIIMGTFILCWLPFFIVAL
VMPFCQESCYMPRWLEDVINWLGYSNSLLNPIIYAYFNKDFQSAFKKIIKCHFCRP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgcgaacaacacgacagcctgggcgcagtttgacaacctctccatcaagacg
cccaaacccgaggacgaggaggtgaagctgagttatcaggtggtcacatccttcctgctt
ggcgcgctcatcctgtgcgcaatctttgggaacgcgtgcgtggtcgcggccatcgccttg
gagcggtctctccagaatgtggccaactacctgatcggttctctggccgtcacagacctg
atggtgtcggtgctggtgctgcccatggcggcgctttaccaggtgttgaaccggtggact
ctcgggcaggttccgtgcgacatcttcatctctctggatgtgctgtgctgcacctcctcc
atcctgcacctgtgcgccatcgctctggacagatactgggccataaccgagcccatagac
tacatgaagaagaggacgccgaggagagccgcggtcctcatcagtgtcacctggctggtc
gggttctccatctcggtgccgccgatgctgatcatgcgctcccagcccaacagcctggcg
gaggacagggcgaaccccaagcagtgcaagatcaggcaagacccctggtacacaatatac
tccacattcggggctttttacatcccgctgacgctgatgttggttttatacgggcggata
ttcaaagctgccaggtttcgcatcaggaggacggtgcgtaaaacggagaaaaagaaagtg
tccgactcttgcttggcgctgtccccggcgctcttccacaaaaagacgcacggagacgcg
cagggcaagagctggaaaaggagcgtggagccgcggccgctgccgagcgtcaacggcgcg
gtgaaacacgcggaggacggcgagtccctggagatcatcgaagtccacagcaactccaag
ggcaacctgccgctgcccaacaccccgagctccgtgccgctgttcgagagcaggcacgag
aaggcgacggaggcgaagcggaagatcgcgctggctcgggagcgaaagacggtgaagact
ctgggcatcatcatgggcaccttcatcctctgctggctgcccttcttcatcgtcgccctg
gtcatgcctttttgccaggagtcgtgctacatgccgcgctggctggaggatgtcataaac
tggctgggctactccaactctctactcaaccccatcatctacgcgtacttcaacaaagac
tttcagagcgcgttcaagaaaatcatcaagtgtcatttctgcagaccgtga
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