Lates calcarifer (barramundi perch): 108901173
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Entry
108901173 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: ERI1 exoribonuclease 2
KO
K18417
ERI1 exoribonuclease 2 [EC:3.1.-.-]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108901173
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901173
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108901173
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
Other RNAi proteins
108901173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
108901173
NCBI-ProteinID:
XP_018558108
UniProt:
A0AAJ7VKB0
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Position
LG5:complement(5240440..5245210)
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AA seq
759 aa
AA seq
DB search
MSTKKLAKELGLLRQRSQSSSGSKKSLVSNQIFSYLIVIDFESTCWREKNNYSQEIIEFP
AVVLNTSSGDIESEFHTYVQPQERPILSEFCTELTGITQMQVEAGIPLQICLSRFCRWLQ
NLQLEKGVVFPNTQQRCSAPSPSQKLCTFLTWSDWDLGVCLQYECKRKQLHKPDVLNSWI
DLRSTYRLFYNRKPKGLNGALQDLGIQFSGREHSGLDDARNTAQLAARMMRDGCVMKITR
SLERTTSIAKPMFGNTNADKKKGKPNTNKEENTLTKNKPSSSKIPPKLCEIKSCSENNTM
NSDTKESSSSVQESVQICQSLVSPRTLLNGTTTSLWGRSRRSVTSEAVANLSSSVMINVT
SPHSNSSKNLVLCSTTVGCLSHLPHPNQLSKTGATVERVEEEETGELLVETEERCGPSYD
DVVLEGDDVMNEGDGECDAEYMSDFDSGLLVCEEPDYSRLTRGQVTLRDNSESSELSTTF
VSTMKMRTDQFNKMGQKSMISEPDTCFAVPKPVSRTSKTICREKGLKTSLQLQEKSDEAA
KNCRTNTPCLLRNQPFIPENTSTPNTSFAKPKPVIMQNIKHKETPKSSFTIYSDRAKQTA
ATSHPSSCSSLYTPKNVLCSLSTNTLSSRTNCSSIPVTMKGGQKITSPLCACGRRAKRQV
VSNGGPNHGRGFYCCPVRRSGSGGRIQKGCEFFKWESALMKSSVVASPAARSSVSLCQFN
STLNCHPTTEINTKKKLLMYWRKSYTCCTTAPTLTLRYF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaaagaaactggcaaaagagctcggattattgaggcagcggagtcagtcttct
tctggatcaaagaaatcactggtatcaaatcaaatattttcatacttgattgtgattgat
tttgagtctacttgctggagagagaaaaacaactacagccaggaaattattgagtttcct
gctgttgtgcttaacacctcctcaggggacatcgagtctgagtttcacacatatgttcaa
ccccaggagcgccccattctgtccgagttctgcaccgagctgaccgggattacgcagatg
caagttgaggcagggatccccctccagatctgtctttctcggttctgccgttggctgcaa
aacctgcagcttgagaagggtgtggtctttcccaacacacaacagagatgttctgcacct
tcaccttctcaaaaactgtgtactttcctcacatggtcagactgggatcttggagtttgt
ttgcagtacgagtgtaaacgcaagcagctccataaacctgatgtactcaacagctggata
gacctgagaagcacatacagactcttttacaacaggaaaccgaaaggcctgaacggggca
ctgcaagatctcggaatacagttttcaggaagagaacattcaggtttggatgatgctcga
aatacagcacagctggcagcgaggatgatgagggatgggtgtgtgatgaagatcactaga
agccttgagaggaccacatccatcgccaaacccatgtttggaaacacaaatgcagacaag
aagaaaggaaagcccaacaccaataaagaggaaaatacgctaaccaaaaacaaaccctca
tcatccaagattcctcctaaattgtgtgaaataaagtcatgttcagagaacaacacaatg
aattcagacacaaaggaaagctcaagttcagttcaggaatctgttcaaatctgtcagagc
ctggtttcacccaggacacttctgaatggcacaactacatcgctgtggggacgcagcagg
aggtcagttacctcagaggctgtcgctaacctttcctcttccgttatgataaacgttact
tcaccacacagtaacagcagcaaaaaccttgttctgtgttcaactactgtgggctgcctt
tctcatctacctcacccaaaccagctctcaaaaacaggagcaacagtggaacgtgtggag
gaagaggagactggagaacttttagtggaaacagaggagaggtgtggtccatcatatgat
gatgtggtgttggagggtgatgatgttatgaatgaaggtgatggagaatgtgatgctgag
tacatgtcagattttgacagtggattgttagtgtgtgaagagcctgactattcacgttta
acaaggggtcaggtcacattgagagacaactctgaaagcagtgagttatctacaactttt
gtatctacaatgaagatgaggacggatcagttcaataagatggggcagaagtcaatgatc
tcagagccagatacatgttttgctgtgcctaagcctgttagtaggacctccaaaacaatt
tgccgcgaaaaaggacttaaaacatctctacaacttcaagagaagtcagatgaagctgca
aaaaactgcaggacaaacacaccctgtctgctcagaaaccaacccttcatcccagaaaat
acctccacacctaatacctcatttgccaaacctaaaccagtcatcatgcaaaacataaag
cacaaagagactcctaagtcttcctttaccatctacagtgaccgagcaaaacagactgca
gcgacctcacatccttcctcctgtagctctctgtacacccccaagaacgtcctctgctcg
ttgtcaaccaacacactctcatcacgcacaaactgttcctccattcctgtgacaatgaaa
ggaggacagaagatcacatccccactgtgcgcatgcggccgccgtgcaaagcgacaggtt
gtatccaacggtggtccaaaccacggccgggggttttactgctgtccggtccgccggtca
ggcagcggaggcaggatccagaagggatgcgagttcttcaaatgggagtcggctctgatg
aagagcagcgtggtggcctctcctgctgccaggtcctcagtttcactctgtcagttcaac
tcaactctgaactgtcatcccacaacagagatcaacactaagaaaaagctattaatgtat
tggagaaagagctacacctgctgcaccacagcacccacactgacactgagatatttttaa
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