Lates calcarifer (barramundi perch): 108901177
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Entry
108901177 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase znrf3
KO
K16273
E3 ubiquitin-protein ligase ZNRF3 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108901177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108901177
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108901177
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108901177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108901177
NCBI-ProteinID:
XP_018558146
UniProt:
A0AAJ7QJX0
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Position
LG13:complement(807125..872571)
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AA seq
896 aa
AA seq
DB search
MMILPRRGSDRVPDSVVLVILVVAASLGTVFAKDTAFVEVVLFESSPNGDYTTYTTGLQG
RFSKAGATISAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPSCLTVLGKAK
RAVQRGATAVIFDVSENPDAIDQLNQVAEDPLKRPVVYVKGNDAVKLMNIVNKQKVARAR
IQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLIKIKLKQRRSQSSMNRMAIQALEKMET
RKFKAKGKGQRESSCGASDSLSSSSTSDCAICLEKYIDGEELRVIPCAHRFHKKCVDPWL
LQHHTCPHCRHNIIEQKKGNPGAACMDPGNPVHGRQRVVLPVHYPGRVHRAGQVTAYPTR
TSMDPHGNPITVLTVDQHPDPQGLYPPQSTSAFLRSYHPTLHLDHSLNPHHCGLEHRGPP
TYPAQPHHAAFKRPKFHGRNFSRAACFSQYETMYQHYYFQGLTFPQQPEGSQGPAVAGQL
GGGGAHKGHHSRAFQQGLLYPTVVHMAPASSSRIGDTGSTSGLSCYHGHRSVCSGYLADC
PGSDSSSSSSGQCHCSSSDSMLDCTEVSNQGVYGSCSTFRSSLSSDYDPYVYRSKSPCRG
SAGEAGAAACTTVPAEDSSSPAPLGHDCLQLPPGASGYNSGDHLSNCSLEPNYSSRSSLE
PRENSNTSTTSAGAPEATGADRGKGAQEESGELGAAACSCCFEVLPPSVECKGQDSDQVG
PLASGRCHRGVEFQSSTSKNYFTPEHMCPSSEQVSYEGLPCCFYKEMKVHRAAAGRYTED
YAVNVQYAHADSEACTGQGCCELNQRIPIIPEDTDCELGTGAETQSSLLPISVTMEAEVR
TGEQHEPREGYFTSGQFRGQPYPQEEETRVLFHPQLSASPTGLGSSSSTNEGGLGI
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgatgattttaccaaggagaggctcggatcgtgtgcccgactcggtggtcctggtgatc
ttggtggtcgccgcttctcttggtaccgttttcgccaaggacactgcctttgtggaagtg
gttctgttcgagtccagtcccaatggagattatactacttacacgactggcttgcaagga
cggttctccaaagcaggagccactatcagcgcggagggggagatcgttcaaatgcatcct
ttgggactatgcaataataatgatgaggaggacctgtacgagtatggctgggttggagtg
gtgaagctggagcaaccagagctggaccccagttgtctgactgtgctgggaaaggcaaag
agagcagtgcagcggggagccacggccgtcatctttgatgtgtcggagaatccagatgcc
atcgaccagctcaaccaggtcgctgaggatcctctgaagcggccggtggtttacgtgaag
ggcaacgatgctgttaagttgatgaacatcgtcaacaagcagaaagtggctcgtgctcgg
atacaacatagaccaccgaggcagcccacagaatattttgacatgggcatcttcctggct
ttctttgtggttgtgtcgctggtttgcctcattctgctcatcaagatcaaactcaagcag
aggagaagccagagctcaatgaacagaatggccatccaggctctggaaaagatggagact
cgcaagttcaaggccaaaggaaagggccagcgtgagagcagctgtggagcctctgattca
ctgagcagcagctccacctctgactgcgccatctgtctggagaagtacattgatggggag
gagctgcgggttatcccctgtgctcacagatttcataagaagtgtgtcgacccctggctg
ctccagcatcacacgtgtccccactgcagacacaacatcatcgagcaaaagaagggaaat
ccaggagcagcatgcatggaccccggcaacccagtccatggccggcagcgggtggtgttg
ccagtccattaccccggcagggtgcaccgagctggccaggtgaccgcctacccaaccaga
accagcatggacccccacggcaaccccatcactgtgctcactgtggaccagcacccagat
cctcaaggtctgtacccaccccagtcaacatctgcctttctccggagctaccaccccaca
ctccatctggaccactcgctcaacccccaccactgtggattagagcaccgcggacccccc
acctacccagcacagccgcatcatgctgcttttaaacgacccaagttccatggtcgcaac
ttttcccgcgcagcctgcttctcacagtacgagaccatgtaccagcactactattttcag
gggttgactttccctcagcagcccgagggtagccaggggcctgcggtggcagggcagctc
ggtggaggaggggcccacaagggccaccacagcagggcctttcagcagggactgttatac
cccacagtggtacacatggcacctgcctcttcttcaaggataggcgataccggcagcact
tctggcctgagctgttaccatggccaccgctcggtgtgcagtggttaccttgctgactgc
cctggtagtgacagtagcagcagcagctcaggtcagtgccactgttcctccagcgactcc
atgttggactgtactgaggtcagcaaccagggggtgtacggtagctgctctacctttcgc
agctcgctgagcagtgactacgatccttatgtgtaccggagtaagagtccgtgtagaggc
tctgcaggggaagcgggggctgcggcttgcaccacagttcctgctgaggactcatcatcc
cctgcacccttgggacatgactgcctccagctccctcctggagcttcgggatataactcg
ggggaccacctctccaactgcagtttggagcccaactacagcagtcgctcatcactggaa
cccagggagaacagcaacactagcactacctcagccggagctccagaggctaccggagca
gacaggggaaaaggggcgcaggaggagtcaggggagcttggggctgcagcctgtagctgc
tgctttgaggtgcttcctcccagtgtggagtgcaaagggcaggactcggaccaagttggg
cctctggcctcaggacgatgtcacaggggggtggagtttcagagctccacgtccaagaac
tactttactcctgagcacatgtgcccttcctcagagcaggtgagctacgaagggctacct
tgctgcttctacaaagagatgaaggtccacagggctgcagcagggcgctacaccgaggac
tacgctgttaatgtgcagtatgcacatgcggactcggaggcctgcactggacagggctgc
tgtgaactcaaccagagaatacccataattcctgaggacacagattgtgaattaggcaca
ggggcagagacccagagcagtttactgcccatcagtgtcacaatggaggcagaggtgcgg
acaggggagcaacacgagcccagggaagggtacttcacctcaggacagtttagaggtcag
ccataccctcaggaggaggagaccagggttttgttccaccctcagctctctgcgagcccc
actggattgggaagcagttcttcaacaaatgagggaggtctgggtatatga
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