Lates calcarifer (barramundi perch): 108901190
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Entry
108901190 CDS
T04895
Name
(RefSeq) double-strand-break repair protein rad21 homolog A
KO
K06670
cohesin complex subunit SCC1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108901190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901190
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108901190
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
108901190
NCBI-ProteinID:
XP_018558129
UniProt:
A0A4W6ER20
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All DBs
Position
LG3:complement(16078488..16090198)
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AA seq
651 aa
AA seq
DB search
MFYAHFVLSKRGPLAKIWLAAHWDKKLTKAHVFECNLESSVESIISPKVKMALRTSGHLL
LGVVRIYHRKAKYLLADCNEAFIKIKMAFRPGVVDLPEENREAAYNAITLPEEFHDFDQP
LPDLDDIDVAQQFNLNQSRVEEITMREEVGNLNLLQDNDFADFGVDDREMMREESAFEVD
IMGTSASNLLLEAEGGANQMADKSNHLEYDDQYKDDFGDNPMENNEGGMLVDKLLSNEDG
GGIFDDPPAITESVMMPQDHGDDDDDFDALSAGAPDSPDSGPTEPLPAMADQAEQTALVH
NEEETFALEPIDITVKETKAKRKRKLIVDSVKELDSKTIRAQLSDYSDIVTTLDLAPPTK
KLMMWKETGGVEKLFSLPAQPLWNMRLLKMFTRCLTPLVPDELRKRRKGGEADSLDEFLK
DLENPEVPREETTGHQQRDVMDQTIMEEASVLQTSAVEGSRTTLDESVMPPPSSQRGLKR
KSQDTEPALPMGALDQQQQQQQQQQQQVSRPCNVTQQLEASSNVDLPPEETTTTNISQLI
ELDLLADKDKKKNDDDSDEEEEEAQGGDQDQEERRWNKRTQQMLHGLQRVMAKTGAQSVS
LLDLCRNNNRKQAAAKFYSFLVLKKQQAVELVQEEPYSDIIAMPGPRFHII
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcccactttgtcctcagcaaacgtgggccgctggccaaaatctggctggca
gcccactgggacaagaagctgaccaaggcacatgtgtttgaatgcaatctggagagcagt
gtggagagcatcatctcacccaaggtgaaaatggctttacgaacatcagggcacctgctg
cttggggtggtgaggatctaccacaggaaggccaagtacctgctggcagactgtaatgag
gccttcatcaagatcaagatggcatttagaccaggtgtggtggatcttccagaggagaac
agagaagcagcctacaatgctatcactctacctgaggagttccacgattttgaccaacca
ctaccggacctcgatgacattgacgtggctcagcagttcaacttgaatcagagcagggtg
gaggagatcaccatgagagaggaggtgggcaacctcaacctgctgcaggacaatgacttt
gctgacttcggggtggatgaccgggagatgatgcgggaggagagtgcgttcgaggtggac
atcatgggaacgtcagcttccaacctgctgctggaggctgagggcggagctaaccagatg
gctgacaagtccaaccacctggagtatgacgaccagtacaaggacgacttcggagacaac
cccatggagaacaatgagggtggcatgctggtggacaagctgctgagtaatgaggatggg
ggcggcatctttgacgaccctcctgccatcacagagagcgtgatgatgcctcaggaccac
ggagacgatgacgacgactttgacgccctctcagcgggagctccagatagtccagattcg
ggcccaacagagcccctaccagccatggcagaccaagcagagcagaccgccctggttcac
aacgaggaagaaacattcgccctggagcccattgacatcacagtaaaggagaccaaagca
aagcgtaagaggaagctgattgtggacagcgtgaaagagttggacagtaaaaccatccgc
gcgcagctgtccgactactccgacatcgtcaccaccctggacctggcgcctcccactaag
aagctgatgatgtggaaggagaccgggggagtcgagaagcttttctccctgcccgctcag
cctctctggaacatgaggcttctcaagatgtttacaaggtgtctgacaccgttggtgcca
gatgagctgaggaagaggaggaaaggtggagaggctgacagtctggatgagttcctcaaa
gatctggagaacccagaggtgcccagagaggaaactacaggccaccagcagagagacgtc
atggaccagaccatcatggaagaggccagcgtgctccagacctcagccgtggagggcagc
aggacgacgctggacgagtcagtcatgcccccaccatcttcccaaagaggcctgaagcgc
aaatctcaggatacagagccagccctgcctatgggagcgttggaccagcaacaacagcag
cagcagcagcagcagcagcaggtgtccagaccctgtaatgtgacccagcagctggaggcg
tcgtccaatgtggacttgcccccagaggaaaccaccaccactaacatcagccagctgata
gagttggacctgctcgctgacaaggacaagaagaagaacgatgacgactctgatgaagag
gaggaggaggcgcagggaggtgaccaggaccaggaagagaggaggtggaacaaaagaact
cagcagatgcttcatggccttcagagggtgatggccaaaacaggggctcagtcagtcagc
ctgctggacctgtgcaggaacaacaacaggaagcaggcagcagccaagttctacagcttc
ctggtgctgaagaagcagcaggcggtggagctcgtccaggaggagccctacagcgacatc
atagctatgcccggacctcgcttccacatcatctag
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