KEGG   Lates calcarifer (barramundi perch): 108901243
Entry
108901243         CDS       T04895                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04137  Mitophagy - animal
lcf04144  Endocytosis
lcf04145  Phagosome
lcf04148  Efferocytosis
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108901243
   04145 Phagosome
    108901243
   04137 Mitophagy - animal
    108901243
   04148 Efferocytosis
    108901243
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108901243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108901243
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108901243
   04031 GTP-binding proteins [BR:lcf04031]
    108901243
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    108901243
 Endosome - Lysosome transport
    108901243
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108901243
  Exosomal proteins of other body fluids (saliva and urine)
   108901243
  Exosomal proteins of colorectal cancer cells
   108901243
  Exosomal proteins of bladder cancer cells
   108901243
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    108901243
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16 BrnT_toxin
Other DBs
NCBI-GeneID: 108901243
NCBI-ProteinID: XP_018558183
UniProt: A0A4W6CT89
LinkDB
Position
LG11:complement(5440943..5451371)
AA seq 220 aa
MAGRGGQARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGVGAGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggcggacaagcacggaccaacggcactgcggcgagcaacaagatctgc
cagtttaagctagtgctgttgggggaatcagcggtggggaagtccagcttggtgctgcgc
tttgtcaaaggccagttccatgaataccaggagagcaccatcggagctgccttcctcaca
cagacggtatgtctggatgacacaacagtcaagtttgagatctgggacactgcaggacag
gaacgatatcacagcttggcacctatgtactacaggggagcccaggctgccattgtggtc
tatgatatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagccagcccaaatattgttattgcactggcagggaacaaagcagacctggccaac
aagagagctgtagatttccaggaagcacaagcatatgcagatgacaacagtttgctcttc
atggagacctcagccaagactgctatgaatgtcaatgagatttttatggctatagccaag
aagcttcccaagaacgagcctcagggtggagtgggtgctggtggacgagccagaggcggc
gtggacctgcaggaagctgcaccacagggcagaagtggccaatgctgtgggggcgggaac
taa

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