Lates calcarifer (barramundi perch): 108901264
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Entry
108901264 CDS
T04895
Symbol
fzd5
Name
(RefSeq) frizzled-5
KO
K02375
frizzled 5/8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
lcf04310
Wnt signaling pathway
lcf04519
Cadherin signaling
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108901264 (fzd5)
04150 mTOR signaling pathway
108901264 (fzd5)
09133 Signaling molecules and interaction
04519 Cadherin signaling
108901264 (fzd5)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108901264 (fzd5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108901264 (fzd5)
G protein-coupled receptors [BR:
lcf04030
]
Frizzled / Smoothened family
108901264 (fzd5)
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Paralog
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Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
108901264
NCBI-ProteinID:
XP_018558208
UniProt:
A0AAJ7VKD3
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Position
LG1:complement(23161452..23165991)
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AA seq
583 aa
AA seq
DB search
MASTVRHALCSPVFSRPLVLLLLLFRCPGLTSGASKDLVCEPITVPMCRGIGYNLTYMPN
QFNHDTQEEVGLEVHQFWPLVRIRCSPDLLFFLCSMYTPICLPDYRKPLPPCRSVCERAK
RGCSPLMSLYGFEWPERMSCEQLPQLGDETLCMDQNSSETTTLAPPFPKPTPKGRTRPPS
PPQCDRECRCRDPLVPIKRESHTLYGRVQTGPLPNCAQPCHQPYFSADEHAFTSFWVGLW
SVLCFISTLTTVATFLIDMERFKYPERPIIFLATCYLFVSLGYIIRLVAGHEQVACGASS
NNGAGDQLHILYDTTGPALCTLVFLLVYFFGMASSIWWVVLSFTWFLAAGMKWGSEAIAG
YSQYFHLAAWLIPSIKSIVVLALSSVDGDPVAGICYVGNQSLENLRGFVLAPLVVYLFTG
SLFLLAGFVSLFRIRSIIKQGGTKTDKLERLMIRIGLFTVLYTVPATIVVACLVYEQHYR
PGWERALACSCLTERQRSGLGPDYAVFMLKYFMSLVVGITSGVWIWSGKTLESWRRFVAR
CCPCWPQKATAPPSMYSEASTALTGHTGTGLTSGIYHKAPSHI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacggtgaggcacgcgctttgcagccccgtgttctcgcggcccctcgtgctg
cttctgctgttgttcaggtgtccaggtctcacgtcaggagcctctaaggatctggtgtgt
gagcccataactgtacccatgtgcaggggcatcgggtacaacctgacctacatgcccaat
cagttcaaccatgacacccaggaggaggtggggttggaagtgcaccagttctggcccctg
gtccggatccgctgttctccggacctgctcttcttcctgtgcagcatgtacaccccaatc
tgcctcccggactaccgcaagccactgccgccctgccgctctgtgtgtgaaagggccaaa
cgtggctgttcccctctgatgagtctgtacggcttcgagtggcctgagaggatgagctgt
gagcagctgccccagctgggcgatgagacactgtgcatggaccagaacagcagcgagacc
accaccctggctcctccgtttcctaagcccacccctaaaggtcggaccagacccccaagc
cccccgcagtgcgacagggagtgtcgctgtcgagaccccctggtccccatcaagagggag
tcccacaccttgtatggccgggtccagactggccccctgcccaactgtgcccagccctgc
caccagccctacttctcagctgacgaacacgccttcaccagcttctgggtgggactgtgg
tcagtgctgtgcttcatctctaccctgaccactgtcgctaccttcctcattgacatggag
cgcttcaagtacccggagaggccgatcatcttcctggccacctgctacctcttcgtctct
ttgggttacatcatccgcctggtggcaggtcatgagcaagtggcgtgtggtgccagcagc
aacaatggtgctggcgaccaactgcacatcctctatgacaccactggcccagctctctgc
acccttgtcttcttgttggtatatttcttcggcatggccagctccatctggtgggtggtg
ctgtctttcacctggtttctggctgcagggatgaagtggggcagtgaggccatcgcagga
tactctcaatacttccacctcgccgcctggctcatccccagtatcaagtccattgtggtt
ctggctctcagctctgtggacggggaccctgtggctggaatctgctacgtggggaaccag
agtctggagaatctgaggggatttgtgcttgcacctcttgtggtttacctcttcaccggc
tcacttttcttactcgccggttttgtgtctctcttccgcatcaggagcatcatcaagcaa
ggtggcaccaagacagacaaactggagcggctgatgatccgtatcgggctcttcacggtg
ctgtacaccgtccccgccaccatcgtggtggcctgcctggtctatgagcagcactaccgg
ccgggctgggagcgagcgctggcctgctcctgcctgactgagcgccagcgctcaggtctg
ggcccagactacgccgtcttcatgctcaagtacttcatgtccttggtggtgggcatcacc
tcaggagtctggatttggtcaggaaaaacccttgagtcctggaggaggtttgtggctcga
tgctgcccctgctggccgcagaaagccactgcgccaccctccatgtacagtgaggctagt
actgctttaacgggacatactggaaccgggctgacatcagggatctatcataaagcccca
tctcatatatga
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