Lates calcarifer (barramundi perch): 108901283
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Entry
108901283 CDS
T04895
Name
(RefSeq) uncharacterized protein LOC108901283
KO
K23310
PHD finger protein 6
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108901283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901283
03009 Ribosome biogenesis [BR:
lcf03009
]
108901283
03036 Chromosome and associated proteins [BR:
lcf03036
]
108901283
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108901283
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Other ribosome biogenesis factors
108901283
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
108901283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
DUF2652
Motif
Other DBs
NCBI-GeneID:
108901283
NCBI-ProteinID:
XP_050929110
UniProt:
A0AAJ8BAS7
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All DBs
Position
LG1:20954085..20963344
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AA seq
547 aa
AA seq
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MNHRPKVCCVLCQRSEETEITGALSTKDEVTAHQNCLLFSSGIYCQNSPEFDDLFGFSVE
DVMKEVKRGGKLTCNKCKRKGATAGCEVGRCKKSYHYPCAIQEGAKAIEEPGEGKYELLC
FKHYQQQQPRDSDSVNGLKAETSKNHNGAGSSKVYCLACENTEGKISLEYLSNGVIMLYC
DKHTPSSYKRNASGDSTVSGLPVCSSDSNSSSSTTRLSKRRLNFSDIQEETPSKRKRRII
DDSSDSDENVPNIECAPLESDFEENANSVPEHQVYPSSLSFTLLLFLTVGQFSRKGSGRP
TASTSDESRGSNKDEDETLIHSDAESESLLLPVKIGTQFQSSPTRGSERSPQTVLAAHLK
VPLVKVVVEERGIGSKPEQSPVHSPDQHTAGPSAPQQNTTRTPPSPSPDQSKRHNATGSP
LCSNLAISPPQPDTICVSLISSSPSPVAPPFDPEPSFDSPSFWKSCNAAGCTQAIFTDFI
NEMNDISSRIQSDQASQEDYDLALKVMAASGKLAELVAKQQKELQQKQMELTKAAAAMKE
VFSALRR
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaccgtcctaaagtttgctgtgtactctgtcagcgctccgaggagacagagata
accggagcattgtcgacaaaagatgaagtcactgctcatcagaactgtttgttattttcc
tctggtatttattgccagaattcaccagagtttgatgacctgtttggtttctctgtggaa
gatgtgatgaaagaggtcaaacgaggaggcaaactgacttgtaacaaatgcaagagaaag
ggtgccactgctgggtgtgaagtcggacgctgcaagaaatcctaccactacccttgtgcc
attcaggagggcgctaaggctattgaagaaccaggcgaggggaaatatgagctgttgtgc
ttcaaacactatcaacaacaacaaccaagagacagtgattctgttaatgggctgaaagct
gaaacctccaaaaatcacaatggagctggttcatctaaggtatattgtcttgcctgtgag
aacacagagggaaaaatcagcttggaatatttgtctaatggagttattatgttgtattgt
gacaaacatactccctcgtcatataagaggaatgccagtggagattctacggtgtctgga
ctacctgtgtgcagcagtgactcaaactcatccagcagtacgacacgtctttccaagaga
cggctgaatttcagtgacatacaagaggagaccccgtctaaacggaaaaggagaataatt
gatgattcttcagattcagatgagaatgtacccaacatagagtgtgcccctttagagtca
gacttcgaggaaaatgcaaactctgttccagagcaccaagtatatccatcctctctttca
ttcactcttctcctcttcttgactgtgggtcagtttagcagaaaaggaagtgggagaccc
acagcgtctacctcagatgaaagcagaggtagcaataaagatgaagatgaaacattgatt
cattcagatgctgagtcagagagtctgctgcttcctgtgaagatcggcacacagtttcag
tcctctccaacaagaggttcggaacgttcacctcagacagtattagccgcacatctcaaa
gtgcctttggttaaggtggtggtggaggaaaggggaatagggtccaaacctgagcaaagt
cctgtccacagtcctgatcaacacaccgctggaccctccgccccacagcaaaacaccacc
aggacccctccctctccatcacctgaccagtccaagcgccacaatgctactggctcacct
ctgtgctccaacttggccatttccccgccccaacctgataccatctgtgtatccctcatc
tcctcctcaccctctcccgtggcccctccctttgacccagagcccagcttcgactcccct
agcttctggaaaagctgcaacgcggcaggatgtacacaggccatctttactgatttcatt
aatgagatgaatgatatctctagcagaattcagtctgaccaggccagccaggaggattat
gatcttgcactaaaagtgatggcggcttctgggaagctagcagagctggtggccaagcag
cagaaagagttacaacagaaacaaatggagctgacaaaggcagcagcagctatgaaggag
gttttctcagcactgaggagatga
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