Lates calcarifer (barramundi perch): 108901287
Help
Entry
108901287 CDS
T04895
Symbol
fhip1b
Name
(RefSeq) FHF complex subunit HOOK interacting protein 1B
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901287 (fhip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108901287 (fhip1b)
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
108901287 (fhip1b)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
108901287 (fhip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
108901287
NCBI-ProteinID:
XP_018558259
UniProt:
A0A4W6DIU4
LinkDB
All DBs
Position
LG1:23438603..23456878
Genome browser
AA seq
1160 aa
AA seq
DB search
MSWLSRLNPRGPGSRSSRSAAPSSPCTADPETCLMVFENHWRQVSWVLEQHEPSSSSDDL
TAVRNHTDQMLCLLAEEKPAESPEGGAGVPPMGPILELVVTENILECLVQWHLRRGLDPD
SQGALLKLFEMLIGQSQQPLLQHTAVLHPLLRLLGACADPELGCPSVLENSLVLLLNQVC
VTMARQPVVLEMLFRAAPAQQGSTNLLIFSLLVPFIHRDGAIGQQARDALLLVMAASASH
EAVARYIAENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLVLFMNSL
EFCNAVVQVAHPLVRCQLLDYLHNGFLVPVMGPALHKSSVDEMIASTAYLDLFLRSVTET
SLLKTFLRFILLHRHDNDTILDTLLTRISSNSRLCMVSLSLFRTLLSLHCEDIMLQLVLR
YLLPCTHVMLSQRRAIRETDIYGKSADKFLSLIPECCRMNSAPSAERDDDNAFWGKVLNS
PSTESPAPHRPSTPSRLSFFIRQQSSGGGSGGGGPSTPTSMEPLQSGPASSHPLSPDSPM
HQQQTHTECLEWDSGYLEYLKDARRGIELCSWACRDWSAPYDGENPSPSTAPLPPPPPTS
NPSMVMFPEHFSFQQGGGGNTPPGQQRAAIVAAARSEWSSSERDSGEWDVTIGKNSCISL
TPRSKKRSLQREELLPKPVPPLVPSSSSSAAPLSTPHPASSPAPHIPTSAITVSYQAMYN
GTMGQGDGCSDSRDRGLEVKKVKRDLGEQQYLDENANQNGSLVTCPSQSCTTLPQSIFSN
SDISDAKSLCPNQIPSQSSNPPPTSDTKLLISDTSNLHSATSDLPEANQTQQSVESLIEE
LLEQAPGEDPQLPGDSNGQGISIEAFTQELRELEDRVKERSRAACQHEETARESLTAERQ
EEELQLSSAPEAKLTGDTKVEGSVVGLCSPARPLNQPASQPYTGPFMVVLFAKLENMLQN
SLYVNILLTGIVAQLACYPQPLLRSFLLNTNMVFQPSVKSLIQVLGSVKNRIEAFAASHE
DFPAMLKKAQQYLVARGKVDWTDSPAAVPTLRRSDSLVKSRKPSLGDLILRHTNSPTRAR
HAAQLALAHVRDGGQSLHSALFRGSGGGGASGLEKQAEALRVKNAVYCAVIFCEFLKELA
ALAQEHAVALPFPHSQEAEE
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctgagcaggttgaatccgcggggtcccgggagtcggtccagtcggagcgcc
gccccctccagcccctgcaccgctgacccggagacctgcctcatggtgtttgagaaccac
tggagacaggtctcttgggtgttggagcagcacgagccgtcatcatccagcgacgatctg
accgcggtgaggaatcacacagaccagatgctatgtctgctggcggaggagaagcctgct
gagagcccagagggaggtgccggcgtgccgcccatgggccccatactggagctggtggtc
accgagaatattctggagtgcctggttcagtggcatctccgccgcggcctggacccagac
agccagggggcactgctcaagctgttcgagatgctcatcggccagtcgcagcagcctctg
ctgcagcacacagccgttctccaccccctgctgaggctgctgggagcctgcgctgaccca
gaacttggttgtccttcagtcctggaaaacagcctggtcctgctgctcaaccaggtctgt
gtgaccatggcccggcagccagtggttctagagatgttgttccgggcagcaccagcccag
cagggctccaccaacctgctgatcttctccctcctcgtccccttcatccaccgggatgga
gccatcggacagcaggcccgagacgcgctgctgctggtcatggcggcctcggccagccac
gaggccgtggcacgctacatcgctgagaattcctacttttgcccggtgttagcgaccggc
ctcagcgctctctactcctccctgcccaggaagatcgaggttcgaggagacgactggcac
gccctgcggcgggaggactggatgggcgtgtcgtcgctcgtactgttcatgaactcgctg
gagttctgcaacgccgtggtgcaggtcgctcatcccctggtccggtgccagctcctggac
tacctccacaatggattccttgtacctgtgatgggccctgccctgcataagtcgtcggtg
gatgagatgatcgccagcaccgcctacctggaccttttcctgcgtagtgtgacggagact
tccctcctcaaaaccttccttcgcttcatcctgctgcatcgccacgacaacgacaccatc
ctggacacactgctcacgcgcattagcagcaattcaaggctctgcatggtgtcgctgagc
ctcttcagaactctgctctctctgcactgtgaagacatcatgctgcagctcgttctcagg
tatctactgccctgtacccacgttatgttgagtcagcgtcgtgccatcagggagactgac
atctatggaaagtcagcggacaagttcctgtcgctgatcccggagtgctgccggatgaat
tcggcgccctctgctgagcgggatgacgataatgcattctggggcaaagtgctgaacagt
ccgagcacagagtcaccggccccgcacagacccagtaccccgtcccgtttatcctttttc
atccgccaacagagcagtggaggaggatcaggaggagggggtccctctacccccaccagc
atggagccgctgcagtcgggtcccgccagttcgcaccccctgtcccccgacagcccgatg
caccagcagcagacacacacggagtgtctggaatgggactcgggttacctggagtacctc
aaagatgcccggcggggcatcgagctctgctcctgggcctgtcgtgactggtcggcaccg
tacgacggagaaaacccctccccgagcacggcgcctcttccaccgcctccccctacctcc
aacccctccatggttatgttccctgagcacttctctttccagcagggaggaggcggtaac
acccctcctggccagcagagggcggccattgtggcggcagcacggtccgagtggagcagt
tcggagcgggacagcggcgagtgggacgttacgattggcaaaaacagctgcatcagcctc
actccgcgctccaagaaacgcagcctgcagagagaggagctcctgccaaaacccgtgcct
cctctcgtcccgtcctcgtcgtcttcagccgcccctctgtcaactccccatcccgcctcg
tccccagctccacacattcccacctctgccatcactgtcagctaccaggccatgtataac
ggaacgatgggacagggggacggctgctcggacagtcgggacagaggcctggaggtaaag
aaagtgaagagagacttgggggagcagcagtatttagatgaaaacgcgaatcaaaacgga
tccctcgtcacgtgcccttcccaaagctgcaccactctcccgcagtccatttttagcaac
agtgatatcagcgatgcaaaatctctttgccctaaccagatcccctcacagagctccaat
cccccgccaacatctgacaccaaactgctgatcagcgacacctcaaacctgcacagcgcg
acctcagatcttccagaagccaaccagacacaacaatctgtagagagcctcatcgaggag
ctgctggagcaggcgccaggagaagacccacagctccccggagactccaacggtcagggc
atcagcattgaggccttcacgcaggaactgcgggagctggaggaccgggtgaaggaacgc
agcagagcggcctgtcagcacgaggagacagccagagagtccctgaccgctgagcggcag
gaggaggaactacagctgtcttcggccccggaggccaagctgacaggggacacaaaggta
gaggggtctgtggttggcctctgtagtcctgccagaccactaaatcagcctgcctctcag
ccatacacaggtccattcatggtggttctgtttgccaagctggagaacatgctccaaaac
tcactgtacgtcaacatcctgctcaccggcatcgtggcccagctggcctgctatcctcag
cccctcctacgttccttcctgctcaacaccaacatggtcttccagcccagtgtcaagtca
ctgatccaggttctaggttctgttaagaaccgcatcgaggcgtttgcagcctcccacgag
gacttccctgccatgctgaagaaagcccagcagtacctcgtggcccgaggcaaagtggac
tggactgactcgcctgcagctgttcccaccctgcggcgctctgattcactagtgaagagt
cgcaaaccgtctctcggagacctgatccttcgtcacaccaacagcccgacccgggctcgg
cacgccgctcagctggccctcgcacacgtacgggacggcggccaatcgctgcacagcgcc
ttgttccggggcagcggaggcggaggggcgtctggcctggagaagcaagccgaggcgctg
cgagtgaagaacgccgtctactgtgctgttatcttctgcgagttcctcaaggagctggcc
gccctggctcaagagcacgccgtcgctctgcctttccctcacagccaggaggcagaggaa
tag
DBGET
integrated database retrieval system
