Lates calcarifer (barramundi perch): 108901315
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Entry
108901315 CDS
T04895
Symbol
zgc:101559
Name
(RefSeq) ras-related protein Rab-33B-like isoform X1
KO
K07920
Ras-related protein Rab-33B
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108901315 (zgc:101559)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901315 (zgc:101559)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108901315 (zgc:101559)
04031 GTP-binding proteins [BR:
lcf04031
]
108901315 (zgc:101559)
Membrane trafficking [BR:
lcf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
108901315 (zgc:101559)
Others
Specific organelles associated proteins
Auto phagosome
108901315 (zgc:101559)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108901315 (zgc:101559)
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
108901315 (zgc:101559)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
SRPRB
G-alpha
TniB
PduV-EutP
FeoB_N
Motif
Other DBs
NCBI-GeneID:
108901315
NCBI-ProteinID:
XP_018558290
UniProt:
A0A4W6DAC5
LinkDB
All DBs
Position
LG1:complement(21669374..21671842)
Genome browser
AA seq
234 aa
AA seq
DB search
MAIENKPGVEFDTVFGRNDSLELSSHHDYETAQARIFKIIVIGDSNVGKTCLTYRFCGGT
FLKNPEATIGVDFRERTLELDGESIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVT
SLSSFESIPEWIEECSRHSVGPQVPRIMVGNKCDLRDRREVPTSAAQCLADRYNFPLFET
SAKDPTEKEHVDAIFLTIAYRLKSHKPLRLKQLSECNVRHLWNQREQEAATCQC
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagaaaacaaacctggggtggaatttgacacagtttttggtcgaaatgactct
ttagagctctcctcgcaccacgactatgagactgcacaagctcggatttttaagataata
gtaataggagactcaaatgtgggaaagacgtgtttgacttacagattctgtgggggcact
ttcctgaaaaacccggaggcaacgatcggggtcgattttagagagaggacgctggagctc
gatggggagagtatcaagttgcagatctgggacacggcaggtcaggagcgcttcagaaag
agcatggtggagcactactaccgcagcgtccatgccgtcatctttgtgtacgacgtgacc
agcctctcgtccttcgagagcatccccgagtggatcgaggagtgcagtcggcactccgtg
gggccccaggtgccccgcatcatggtaggaaacaagtgtgatctgagggaccgccgggag
gtccccacatcagctgcccagtgtcttgccgaccgctacaacttcccattgttcgagact
tcagccaaagatcccaccgagaaggaacatgttgatgctatctttctgactatagcttat
aggctgaagagccacaaacctctgagactgaagcagctgagtgagtgcaatgtaaggcat
ctgtggaaccagagagagcaggaagcagcaacttgtcaatgctga
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