Lates calcarifer (barramundi perch): 108901344
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Entry
108901344 CDS
T04895
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108901344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108901344
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Others
R-spondin
108901344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_14
LRR_1
LRR_9
7tm_1
LRR_EndoS
LRRNT
LRR_LRWD1
DHU1_N
LRR_R13L1-DRL21
EpCAM_N
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
108901344
NCBI-ProteinID:
XP_018558328
UniProt:
A0AAJ7QKR5
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All DBs
Position
LG18:complement(13607566..13641012)
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AA seq
964 aa
AA seq
DB search
MPGFVALLAAFAVLSAGLRSSVAGVEMLFSVAGVKSSAAPAVERTAAGVNTTTVARVESS
GDGGAGRAGCPGHCRCEVEGLLHRVDCSDLGLREIPSNLSVFTSYLDLSMNNLTVLSSGS
LSNLHFLEELRLAGNDLSFIPRGAFAGLYNLKVLMLQNNQLRSVPAEAFNNLHNLQSLRL
DANHISSVPSGCFSGLRSLRHLWLDDNSLTEVPAEALSDLSALQAMTLALNHISHIPDHV
FSKLSRLVVLHLNNNRIVSMGTNCFHGLHSLETLDLNYNSLVEFPTAIRSLSHLKELGFH
SNNIQSIPEHAFTGNPSLITIFFYDNPIQSVGRSAFQNLPELRTLSLNGAADLTEFPDLT
GTKSLESLTITGARITSLPSSVCEQLPNLQLLDLSYNQIQTLPSFSGCESIQKIDLHHNE
VEELQENTFHGLMSLSSLDLSWNRLSSVKPNSFSALPALTKLDLSSNQLSSLPLVGLQSL
THLRLAGNDQLMELIPREDLPRVRVMELPYAFQCCAFVSCERRGGGGGGGGGGGGGGGLS
WEREEAADFTRSDASVLSSQVDQDWEDFLMEFEDEPKPHHSVHCSPAPGPFRPCLHLLGS
WLIRGGVWLIAVLSLVSNSLVVLSIFFSPMATAASVTPPKLLIGLLALVNGLMGVWSGWL
AAVDAWTFGSFWRYGAKWESSFLCRLSGFLCVFASQTSLFLLTVAALERCLAAAQRYKTE
EHSGRSSSQLSICLSILLCFLLGLGVTLPPLVAGHSSTSLCLPLPSSSSSSSSLVFSVSL
VLLDSLCFLLMTLAYTRLYCRANKAPPASEEETALTRHVAWLLFSDCLLYLPVAFLSFSS
LLRLPTAGPEAAKGVLLLVAPLPACVNPLLYLLFNPLAREELAVMVKRTCGAVVVPRLHR
GGGGGRSMPVSMDSTYDEDAEKQSCDSTQALVAVGGTKEEEEDEERGRIKTETQHSVAFV
VPRH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtttgtggctctgttggccgcgtttgcagtcctctcggccgggttgaggagc
tccgtagccggggtagagatgctgttctccgtagccggggtgaagagctccgccgcgccc
gcggtggagaggacagcagccggggtgaacactaccactgtggccagggtggagagctcc
ggggacggaggagcggggcgggctggctgccctggccactgtcggtgcgaggtggaaggg
ctgctgcaccgagtggactgctcggacctggggctccgggagataccgagcaacctgagc
gtcttcacatcctaccttgatctgagtatgaataatctgactgtgttgtccagcggaagt
ttgtccaacctgcacttcctggaggagctgcgtttggcgggaaacgatctgtcattcatc
cccagaggagcgttcgccggcctctacaacctcaaagtgctgatgcttcaaaacaaccag
ctgaggtccgtccctgctgaggcgttcaacaacctgcacaacctgcagtcactccgcctg
gacgccaatcacatctccagtgttcccagtggctgtttctccggcctgcgctcgctccgt
cacctgtggttggacgataactctctgaccgaggtgccggcggaggctctgagtgacctg
tctgccctgcaggccatgacccttgccctcaaccacatcagccacatccctgaccacgtc
ttcagcaaactgagccgcctggtggtgctgcatctcaacaacaataggatcgtttccatg
ggaacgaactgcttccacggactccacagtttggagacgctggatttgaactacaacagt
ctggtggagtttcccacagccattcgctcgctgagccacctcaaagagcttggtttccat
agcaacaacatccagtccatccctgagcatgctttcactgggaacccatcactgatcacc
atatttttctacgacaatccgatccagtctgttggacgctcagcctttcaaaacctacca
gagcttcgcacactctctctgaacggtgctgcagatctcacagagtttccagatctgaca
ggaaccaaaagtctggagagcctgaccatcacaggagctcggatcacctctctgcccagc
tcagtgtgtgagcagcttccaaacctgcagctacttgatctctcctataatcagatccag
actcttcccagcttctctggctgtgaaagtatccagaagattgacctgcaccataacgag
gtggaggagctgcaggagaacaccttccacggtctgatgtctctgagctctcttgattta
tcatggaacagattgtcgtcagtgaagccaaactctttctctgctctgcccgctctcacc
aaacttgacctgtcgtccaatcagctgtcctccctccctctggttggtctgcagagttta
actcacctgcgattagctggaaacgatcagctgatggagttaatacctcgagaggacctg
ccccgagtcagggtgatggagcttccttacgccttccagtgttgcgcctttgtctcctgt
gagaggagaggtggaggaggaggtggaggtggaggtggaggaggagggggaggtttgtcc
tgggagagagaggaagcagcagactttaccaggagtgatgcctccgtcctctccagccaa
gtggatcaggactgggaggatttcctgatggagtttgaggatgaaccaaaacctcaccac
tcagtccactgcagccctgcaccaggaccatttcgtccttgcctccatctgctcggcagc
tggttgatccgtggaggggtgtggctcattgcagtgctctcattggtcagcaacagcctc
gttgtgctgtcaatcttcttttcccccatggccaccgccgcctcagtcacgccccccaag
ctgctgattggtctgctggccctggtgaatggcctgatgggagtgtggagcggctggctg
gcggcagtggatgcctggacgtttgggagcttctggaggtacggggcaaagtgggagagc
agcttcctgtgtcgactcagcggcttcctgtgtgtttttgcatcgcagaccagcctcttc
ctgctcactgtcgcagctctggagcgatgcctggctgccgcacaacgctacaaaactgag
gagcacagcggtcgctcctcgtcccagctctccatctgtctgtccatacttctttgcttc
ctgttgggtttgggcgttacgctgccccccctggtagccggacacagtagcacatccctc
tgtttgccgctgccttcctcctcctcctcctcctcctccctggtcttctccgtctctctg
gtgctcctcgactcgctgtgcttcctcctcatgacgctcgcctacactcgcctctattgt
cgggccaacaaagctccacccgcctcagaggaggagacggcactgactcgacatgtcgcc
tggctgctcttctccgactgcctcctctacctccctgtggccttcctctccttctcctcc
ctgctgcgtctccccaccgctgggccagaggcagcaaagggggtgctgctgctcgtggca
ccgctgccagcctgcgtcaaccctctgctctacctcctcttcaacccacttgccagggag
gaactggcagtgatggtcaaacgtacctgtggggctgtggtggtgccaagactacacaga
ggaggaggaggaggaaggtcgatgcctgtaagcatggattcaacgtacgacgaagacgca
gagaaacagtcatgtgactcgactcaggcactggtagcagtcggaggcactaaggaggag
gaggaggacgaggagagaggaaggataaagacagagacacaacattcagtggcgtttgtc
gttccacgtcactag
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