Lates calcarifer (barramundi perch): 108901347
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Entry
108901347 CDS
T04895
Name
(RefSeq) receptor-type tyrosine-protein phosphatase R
KO
K04458
receptor-type tyrosine-protein phosphatase R [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108901347
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108901347
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108901347
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108901347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Tc-R-P
PTP-SAK
DSPc
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
108901347
NCBI-ProteinID:
XP_018558334
UniProt:
A0AAJ7VKB9
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Position
LG18:13669168..13714283
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AA seq
708 aa
AA seq
DB search
MSRRRGRGGFLTMFLALCLLWTQLLITESSSGDHELRLFPSRRSGHLPPPLDPQRNLNQQ
QHHNVDESHTHLHHHHHHHHRQPPAGLDKVMPATLLESRFRQEPGGHRTLNLLARPHHEV
QPEHAAVSARHLVTVYLAVDVKRLNVSLLRWFREGVAAALGIPAGHVHINRLNEKKNGIE
LFVSSDRLGISEPRPAEEVIQSLNVRVLHRHLGHFGITEVSTEKNVLQGEQRDHVWSREG
FYAVVLFFTVFVIVITCLMVLYRLKEKVQVSERQLKAPPPDLHLTPTIPPDSAQRSKGTK
VVTSGSMVQAELPPAVATPVPQQQPIVACRRLAPPVVPLPSPAPVPVVNSNNHTPLTSSA
PVTANNELKPCPSPFRMKPAAGLQERRGSNVSLVLDMSALGSVEPLSVAVVTPKESATRE
YLLSAGRPLTRQQLRDIINNTHKLHAEFTEIPMNFIDPKELDIPNHGTKNRYKTILPNPH
SRVILKSKSCNDLLSSYINANYIRGYRGDEKAFVATQGPMVNTVNDFWQMAWQEESPVIV
MITKLKEKNEKCVLYWPEKRGIYGKVEVLVNSIRECEHYTTRSLTLKCGNQTRVLQHYWY
TSWPDHKTPDSALPLLQLMADVEAERRTAAAMGPVIVHCSAGIGRTGCFIATTIGCRQLQ
LEGVVDVLSITCQLRADRGGMIQTGEQYEFVHHALSLYEARLSAETGQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagacgaggaagaggaggatttctcaccatgtttctggcattgtgtctatta
tggacgcagctactgatcacagaatcgtcctctggtgatcatgagcttcgcctcttccct
tctcgtcgctctggtcacctccccccacctctggaccctcagcgcaacttgaaccaacag
cagcatcacaatgtggacgagtcccacacccaccttcatcatcatcatcaccaccaccac
cgtcagccccctgctggtttagacaaggtgatgccggccaccctcctggagtctcggttt
cgtcaggagcctggtggtcatcgaaccctcaacctgctggcacggccacatcacgaagtg
cagcctgagcacgccgcggtgtctgcacgacatctggttaccgtgtacctggctgtggat
gtgaagaggctgaacgtcagtcttcttcggtggtttcgggaaggtgtagcagcggcactc
ggcattcctgcaggacacgtccacatcaaccggctgaatgagaagaagaatggcatcgag
ctcttcgtatcctctgataggctggggatctcagagccccgccccgctgaggaggtcatc
caatcactgaatgtccgggtccttcaccgccacctgggacatttcggcatcactgaggtc
tcgactgagaaaaacgtcctgcagggtgagcagagggatcacgtgtggagcagagagggt
ttttacgccgttgtcctcttcttcaccgtctttgtcatcgtcattacctgcttgatggtt
ttgtaccgactcaaggagaaggttcaggtttctgagagacagctgaaagctccgccccct
gacctccacctgaccccaaccatccctccagactctgcccagaggtcaaagggcaccaag
gttgtgacatcaggaagcatggtccaggctgagctccctccagctgtagccacgcccgtt
ccccagcagcagccaattgtagcctgccgccgccttgctccacctgttgtccctctgccc
agccctgcccctgtccctgttgtcaacagcaacaaccacactcctctcaccagcagtgcc
ccggtgacagccaataacgagcttaagccctgcccctcccccttcaggatgaaacctgcc
gcaggattgcaagaaagacgtggctctaatgtctctctggtgttggacatgtcggctctc
ggctctgtagagcccctcagtgttgccgttgtaacccccaaagagtcggcgacgagggaa
tacctgctgtctgctggccgcccactgacgagacagcagctccgagacatcatcaacaac
acgcacaagctgcatgccgagttcaccgaaattccaatgaatttcattgatcccaaggag
ctggatattccaaaccatggaaccaagaacagatacaaaaccatactaccgaatcctcac
tccagagtgattctgaagtccaagagctgcaacgacctgctgagctcctacattaatgct
aattatatacggggttaccgaggcgatgagaaggcattcgtcgccactcaaggtcccatg
gtgaacacggtgaacgacttctggcagatggcatggcaggaggagtcgccagtcatcgtc
atgatcaccaaactgaaagagaagaatgagaaatgtgttctctattggccggagaagagg
gggatctatgggaaggttgaagtgttggtaaacagcatcagagagtgtgaacactacaca
actcgcagcctcacactcaagtgtgggaatcaaacccgcgtgctgcagcattactggtac
acatcgtggcctgaccacaaaaccccagactctgctttgccactgctgcagctgatggct
gatgttgaggcggagagacgaacagccgccgccatgggaccagttattgtccactgcagt
gctgggattggccggaccggctgcttcattgctacaacaataggctgtcggcagctgcag
ttggagggagtggtggatgtgctgagtatcacatgccagctccgagccgacagaggtggt
atgatccagacgggtgagcagtatgagtttgtccatcatgcactgagcctgtacgaggcc
cgcctctccgcagaaactggccaatga
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