Lates calcarifer (barramundi perch): 108901350
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Entry
108901350 CDS
T04895
Name
(RefSeq) T-complex protein 1 subunit beta
KO
K09494
T-complex protein 1 subunit beta
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108901350
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108901350
04147 Exosome [BR:
lcf04147
]
108901350
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP60 / Chaperonin
108901350
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
BBS-CCT complex
108901350
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108901350
Exosomal proteins of colorectal cancer cells
108901350
Exosomal proteins of bladder cancer cells
108901350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2529
Motif
Other DBs
NCBI-GeneID:
108901350
NCBI-ProteinID:
XP_018558340
UniProt:
A0A4W6D0E4
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Position
LG18:complement(13576187..13582123)
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AA seq
535 aa
AA seq
DB search
MASLSMAPVNIFKHGADEEKAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLGGGKGAT
VTVTNDGATILKAIGVDNPAAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAELLIAKK
IHPQTIISGWRKATQAAREALREAAADHSNDPTRFQEDLLNIARTTLSSKLLTHHKDHFA
QLAVNAVLRLKGSGNLEAIHVIKKLGGSLTDSYLDEGFLLDKKIGVNQPKRLENANILIA
NTGMDTDKIKIFGSRVRVDSIAKVADIELAEKEKMKEKVDRILKHGINCFINRQLIYNYP
EQLFAQAGVMAIEHADFAGVERLALVTGGEITSTFDHPEMVKLGHCKLIEEVMIGEDTLI
HFSGVEMGEACTVVLRGATQQILDEAERSLHDALCVLAQTVKEPRTVYGGGCSEMLMAKV
VTDLANRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAHQENKTTFGLNM
SDGTVGNMVELGITESFQVKRQVLLSASEAAEMILRVDNIIKAAPRKRVPDHHPC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttatcaatggccccagtcaacatctttaaacatggagctgatgaagaaaaa
gccgagactgcacgactgtcctctttcattggcgccatcgctatcggagatctggtgaag
agcactctgggcccaaaggggatggataagatcttgctcggaggagggaaaggcgccaca
gtgacagtgaccaacgatggagcgacgattctgaaagccatcggagtcgataaccctgct
gctaaagtcctggttgacatgtcaaaggttcaggacgatgaagtcggagatgggactacg
tctgtcactgtgctggctgccgagctgctgagggaggcggagctcctgatcgctaagaag
attcacccacagaccatcatctccggctggaggaaggcaactcaggccgccagagaggct
ctgagagaggctgcagccgaccacagcaacgacccaactcgtttccaggaggacctgctg
aatatcgcccggacaaccctgtcctccaaactgctgactcaccacaaagaccacttcgct
cagctcgccgtcaacgccgtcctgaggcttaagggctccggcaacctggaggccatccac
gtcatcaagaagctgggaggcagcctcactgactcctacctggacgaaggtttcctgttg
gacaagaagattggagtgaaccaaccaaagaggctggagaacgccaatatcctgatcgcc
aacacaggcatggacactgacaagatcaagatctttggctccagggttcgtgtggactcg
atagcgaaggttgcagacatcgaactcgcagagaaagaaaagatgaaggagaaggtcgac
cgaatcctgaagcacggcatcaactgcttcatcaacagacagttgatctataattaccca
gagcagctgtttgctcaggccggtgtcatggccatcgagcacgctgacttcgccggcgtc
gagcgcctcgctctggtcactggcggagagatcacctccaccttcgaccaccccgagatg
gtgaagctcggtcactgcaaactgatcgaggaggtgatgatcggagaggacacactcatc
cacttctccggagtcgagatgggtgaggcgtgcaccgtcgtcctgcgaggagcaactcag
cagatcctggacgaggcagagcgctcgctgcatgacgctctgtgtgtgttggctcagact
gtgaaggaaccacgcactgtctatggaggaggctgctccgagatgctgatggccaaggtg
gtgactgatctggccaataggacgccagggaaggaggccgttgccatggagtcatttgcc
aaggctttgaggatgctgccgaccatcatcgctgacaatgccggctacgacagcgcagac
ctggtggctcagctgagagctgctcaccaggagaacaagacgacctttggactgaacatg
tctgatggcacggtgggtaacatggtggagctgggcatcacagagtcgttccaggtgaag
cgtcaggtgctgctgagcgcctctgaggctgctgagatgatcctgagagtcgacaacatc
atcaaagctgctcccaggaagagagtccctgaccatcacccctgctag
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