Lates calcarifer (barramundi perch): 108901387
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Entry
108901387 CDS
T04895
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108901387
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108901387
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
108901387
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108901387
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
HEAT
TOR1L1_N
MMS19_C
UME
Vac14_Fab1_bd
Cnd1
Adaptin_N
mTOR_dom
CLASP_N
VHS
Dcc1
Motif
Other DBs
NCBI-GeneID:
108901387
NCBI-ProteinID:
XP_018558372
UniProt:
A0A4W6CZ84
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Position
LG18:complement(13401206..13416310)
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AA seq
1234 aa
AA seq
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MASASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVRMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAASVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLCRQGGLLVNFHPSILSCL
LPQLTSPRLAVRKRTIMALGHLVMSCGNLVFIDLIEHLLTELGRNDNMSTTRTYIQCTAA
ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVPTVISI
CLRYLTYDPNYNFDDEDEDDNAMDAEQNDEDYQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYRSVSPALVCRFKEREENVKADVFHAYLSLLKQTRPAQSWLADPDAMEQ
GDTPLTMLQSQVPMIVKALHKQLKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLIPGI
IFSLNDKSSSSNLKIDALACLYVIMVTHPAHAFHAHVPALVPPVVACVGDPFYKITSEAL
LVTQQLVKVIRPLDSQSEGSESFDPSPYINDLFTCTIKRLKAADIDQEVKERAISCMGQI
ICNLGDRLPAELPGTLLIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLPDAVPILA
SFLRKNQRALKLCTLAALDILLRNYSSAVTPVMVDAVLAELPPLISESDMHVSQMALSFL
STLAVTHPSSLGQLSGGNILQQLIALVRSPLLQGGALAAMLDFYQALVSTDTPGLGYMDL
LRMLTGPVYSQSAALPHKQAYCSIAKCVAALTRACPTEGPAVVGQFIQDVKNSRSTDSIR
LLALLSLGEVGHHVDLSSQPELKTVILDAFSSSSEEVKSAASYALGSIAVGNLPEYLPFV
LQEISSSKRQYLLLHSLKEIISSASVSGLKPYVESVWTLLLKHCECQEEGTRNVVAECLG
KLTLIDPETLLPRLKGYLLSGSSYARSSVVTAVKFTISDQPQPIDPLLKNCIGDFLKTLE
DPDLNVRRVALVTFNSAAHNKPSLIRELLDSVLPQLYNETKVRKELIREVEMGPFKHTVD
DGLDLRKAAFECMYTLLDSCLDRLDIFTFLNHVEDGLKDHYDIKMLTFLMLARLSSLCPS
AVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVVALLTIPEAEKSPLMS
EFQSQISSNQELAAIFDSIQRDSSSANMESMDTS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctcgtaccacatctccaacctgctggagaaaatgacctccagtgacaag
gatttcaggtttatggcgactaacgacctgatgacggagctacagaaagattcaatcaaa
ctggacgacgacagcgagaggaaggtggtgaggatgattctgaagctgttggaagacaag
aatggagaagttcagaacctggccgtcaaatgcctggggcccctggtcagtaaggttaag
gagtaccaggtggagacaatcgtggacactctgtgcaccaacatgctgtcggacaaagag
cagctcagagacatttcatccattggactcaaaactgtgatcggagagttaccgcccgcc
tccagtggctcagctttagccgccagtgtttgtaagaagataacgggtcgtctgacgagc
gccatcgccaaacaggaggatgtctctgtccagctcgaggcgcttgacatcatggccgac
atgctctgcagacagggaggtctgctggtgaatttccacccctccatcctcagctgtctg
ctcccccagctcacctcccccagactggctgtcagaaagaggactatcatggctctgggc
cacctggtgatgtcctgcgggaatctggtcttcattgatctgatcgagcacctcctgacc
gagctggggaggaatgacaacatgtcgaccaccaggacctacatccagtgcacggctgcc
atcagcagacaggccggacaccggatcggagagtatctggagaagatcattcctctggta
gtgaagttttgtaacgtcgatgatgacgagctcagagagtactgtatccaggccttcgag
tcctttgtcaggaggtgtcccaaagaagtctacccccatgttcccacggtcatctccatc
tgtctgcgctacctgacctacgaccccaactacaactttgacgatgaagacgaggacgac
aacgccatggacgcagagcagaatgacgaggattaccaaggcagcgacgacgagtacagc
gatgacgacgacatgagctggaaggttcgacgggcggcagcaaagtgtttggacgccgtc
gtttcaactcgtcatgagatgctgccggagttttatcgctccgtctctcctgcactcgtc
tgtcgcttcaaggagagggaggagaatgtgaaggcggatgttttccacgcctatctgtcg
ctgcttaaacagaccagaccggctcagagctggttggctgatccagacgccatggaacag
ggagacacgcccttgacgatgctgcagagccaggttcccatgatagtaaaagctcttcac
aagcagctgaaggagaaaagtgtcaaaactcgtcagtgttgtttcaacatgttgactgag
ctggtgaacgtcctccctggagccctgactcagcacatccctgtactaataccaggtatc
atcttctctctgaacgataagtcgagcagctccaacctaaaaatcgacgccttggcctgc
ctctacgttatcatggtcacgcatcccgctcacgccttccatgcccacgtccctgccctc
gtcccgcccgtggtggcgtgtgtgggagacccgttttacaagatcacctctgaggctctg
cttgttactcagcagctcgtcaaggtgatccgacctctggacagccaatcagaaggctcg
gaaagcttcgacccctccccctacatcaacgacttgttcacctgcacgatcaaacgtctg
aaagctgccgacattgatcaggaggtcaaagaacgagccatctcctgtatgggacagatc
atctgtaacttaggtgaccgcctgcccgcagaactaccaggaacgttgctgatcttctta
gaacgcctcaagaacgagatcacaagactgacgacagtaaaagctctgacactgatcgct
ggctctcccctgaaaatcgatctgaggccggttctccccgatgctgtgcccatcctcgcc
tccttcctccgcaagaaccagcgagccctgaaactctgcacgctggctgctctggacatc
ctgctcagaaactacagctctgcggtgactccagtcatggtggatgctgtcctggccgag
ctgcctcctctcatctcggagagcgacatgcacgtgtctcagatggcactgagcttcctg
tccacgctggcggtgactcacccgtcctcgctgggtcagctgagcggaggaaacattctc
cagcagctcatcgcactggttcgatccccgctgctgcagggtggagcgctcgccgcaatg
ctggacttctaccaggccctggtgtccacagacactcctggtctgggttacatggacctg
ctgaggatgctgactggtccagtttactcccagagtgccgctctgcctcacaaacaggcc
tactgctccatcgccaaatgtgttgctgctctgactagagcctgtcccaccgagggacct
gctgtggttggacagttcatccaggatgtgaagaacagccgctccacagactctatcaga
ctgctcgctctgctctcactgggtgaggtgggacatcacgtggacctcagtagccaacca
gagctcaagacagtcatcctggatgccttttcctcctccagtgaagaggtgaagtcagca
gcctcctatgctttgggaagtattgcagtggggaatcttccagagtatctgcccttcgtt
ctgcaggagatctcatcctccaagagacagtatctgctgctgcactcactcaaagaaatc
atcagttcagcatcggtgtctggtctgaagccgtacgtagagtcagtttggactctgctg
ctcaaacactgcgagtgtcaggaagaaggaaccaggaacgtggtggccgagtgtctgggc
aaactgacgctgatcgaccctgaaaccctgctgcctcgcctcaaaggatacctgctctca
ggttcatcgtacgccaggagctccgtggtaacagcggtgaagttcaccatctctgaccaa
ccacagcccatcgacccgctgctgaagaactgcataggtgatttcttgaagacactggag
gacccggacctgaatgtgcgtcgtgttgccttggtaacatttaactctgctgcccacaat
aagcccagtctgatccgagagcttctggactctgttttaccgcaactttataacgagacc
aaagtcaggaaggagttgattcgagaggtggagatgggtccgttcaaacacacggtggac
gatgggttggacctgaggaaggctgcgttcgagtgcatgtacactttgctggacagctgc
ctggacagactcgacatcttcaccttcctgaaccacgtagaggacggtctcaaggaccac
tatgacatcaagatgctgacgttcctgatgctggccagactgtcgtctctgtgtcccagt
gctgttctgcagagactggaccggctggtggagccactgagagccacctgcaccaccaag
gtgaaggcgaactcagtgaagcaggagtttgagaagcaggacgagctgaagcggtctgca
atgcgagctgtcgtcgctctgctgacgatccccgaggcagagaagtcgccgctgatgtcg
gagttccagtcccagatctcatccaatcaggagctggcggccatctttgactcgatccag
agggactccagctccgccaacatggagtccatggacaccagttaa
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