Lates calcarifer (barramundi perch): 108901388
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Entry
108901388 CDS
T04895
Name
(RefSeq) transcription factor ETV6 isoform X1
KO
K03211
ETS translocation variant 6/7
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901388
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
108901388
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Gene cluster
GFIT
Motif
Pfam:
Ets
SAM_PNT
TFIIA
SAM_3
Motif
Other DBs
NCBI-GeneID:
108901388
NCBI-ProteinID:
XP_018558373
UniProt:
A0A4W6D3P6
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Position
LG18:complement(14095651..14123946)
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AA seq
475 aa
AA seq
DB search
MSESSSAATKQERSSFSPSANPLPNSTSSPIHAPAARPASRMEDEPARLPAHLRLQPVFW
SREDVAQWLRWAEKEFALRPITSSSFQMNGKALLLLTKEDFRYRSPHSGDVLYELLQHIL
KQRKPHVFYPSAYFPGNSFHSLPESAVPHLKLEDTVRRGPRGTEPLTQHPPTIELRHRSR
SPHHPATRRSPLESNHPRPANEDSLQTFSQLPDSNHHLPEEMYPLSVSPAAPNGRCTTPR
EPPCPGSPGGQEAAPPRVIQLMPSTIMNPLLLSPSRSSGGAGMDYRHSRSGPLSQASLEN
GRESKVHGHHHPIPLAQQQQQQQQQQQQHLLQQEEALYRNHVIMPVSPPEEQQMPIGRIA
DCRLLWDYVYQLLSDSRYENYIRWEDPESKVFRIMDPNGLARLWGNHKNRTNMTYEKMSR
ALRHYYKLNIIRKEPGQRLLFRFMKTPDEIMNGQTDRLERLESDIDDQIYIKEEC
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcctcctccgctgcgaccaagcaggagaggagctctttcagtccttccgcg
aacccgctgccaaactccacttcctcccccatccatgctcccgccgcgaggccagccagc
cgaatggaggacgagcctgccaggctgcctgcgcacctgcgtttgcagccagtcttttgg
agcagggaggacgtggcccagtggctgcgatgggccgagaaggagtttgccctgcggccg
atcaccagtagctctttccagatgaatggcaaagccctgctgctgctcaccaaggaggac
ttccgctaccgatccccccactccggggacgtcctgtatgagctgctgcagcacatcctg
aagcagaggaagccccatgtgttttacccgtcggcctacttccccgggaactccttccac
tcgctgcctgaaagcgctgtgccacacctgaagctcgaagatacggtacgacggggtcca
cgtggtacagagccactcacccagcatccaccaactattgagctgcgacaccgctcccgc
tcccctcaccacccagcaacacgacgatcccctctggagtcaaaccaccctcgccccgcc
aacgaggactccctccaaaccttctcccagctgcctgacagcaaccaccacctgcccgag
gaaatgtacccattgtcggtgtccccggctgcaccgaacggacgctgcacgacgccccga
gaacccccctgcccaggcagccctggcggccaggaggcagcccctcctcgcgtcatccag
ctcatgcccagcaccatcatgaaccctctgctcctcagcccgagtaggagcagtggaggt
gccggcatggactacagacacagccgcagcggacccctatcgcaggcgtcacttgagaac
ggccgtgaaagtaaagtccacggccaccaccatccaataccactggcacagcagcagcag
caacagcagcagcagcaacaacagcacctactgcagcaggaggaggcactctacaggaac
catgtcatcatgccagtgtctcctccagaggagcaacaaatgcccattggacggatagca
gactgcaggctgctgtgggactacgtctaccagctcctgtcagacagcaggtacgagaac
tacatccgctgggaggatccagagagcaaagtcttccgcatcatggaccccaacggcctg
gccaggctctggggcaatcacaagaacaggacaaatatgacgtacgagaagatgtcgcga
gcactgagacactactacaaactgaacattatcaggaaagagcctggacaaagacttctg
ttcaggttcatgaaaaccccagatgagataatgaacggacagacagaccggttggagcgc
ctggagtccgacatagatgatcaaatctacatcaaagaggaatgctga
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