Lates calcarifer (barramundi perch): 108901394
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Entry
108901394 CDS
T04895
Name
(RefSeq) glutamate receptor-interacting protein 1 isoform X1
KO
K20251
glutamate receptor-interacting protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108901394
Membrane trafficking [BR:
lcf04131
]
Protein recycling
Others
Glutamate receptor-interacting proteins (GRIPs)
108901394
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
108901394
NCBI-ProteinID:
XP_050933863
UniProt:
A0AAJ8BLL8
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Position
LG18:13424418..13474895
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AA seq
1140 aa
AA seq
DB search
MPGWKKNIPACLQPDQEGDEGPYTKHSAGSRPPDGALAIRRQSIPDEFRGCSVVELMKKE
GTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLNVGDYIRSVNGINLAKFRHDEIISL
LKNVGERVVLEVEYELPPVSVQGSGVMFKNVEVTLHKEGNSFGFVIRGGAHEDRNKSRPI
VITTIRPGGPADREGTVKPGDRLLSIDGIRLHGSTLSEAMSILKQCGQEATLLIEYDVSV
MDSVATASGPLLVEVAKATGSSLGVALSTSMFCNKQVIIIDKVKPASIADRCGALHAGDH
ILSVDGKSMEFCSLAEATQLLSASCQTVRMEILPQHQARPALNAPQHVKVQRSPRPLPWE
TGGSAPILPPYHYNTYHPDQSAARSHNRHTNNPPLSHSFSPGSMSAYSLSSLNMSTLPRN
MYPTSPRGTLMRRKAKKKDFKSSLSLASSTVGLAGQVVHTETTEVTLLGDGIMGFGLQLQ
GGVFATETLSSPPLIAYIDPDSPAERCGILQIGDRILSINGVPTEDSTLEETNQLLRDSS
ITAQLTLEIEFDVAESVIPSSGTFHVKLPKKPGVELGITISSPSNRKPGDPLIISDIKKG
SVAHRTGTLELGDKLLAIDNIRVENCSMEEAVQILQQCEELVKLKIRKDEDNSDEQEVSG
SIIYTVELQRYGGPLGITISGTEEPFDPIIISSLSKGGLAERTGAIHVGDRILAINSSSL
KGKPLSEAISLLQQAGETVTLKIKKQGELSSPKSCVIGPGLGSGTGLGHENQDGEDEPVI
MVAPPSSQRAFTTLPSVDSAVESWDGSNMDSSFTTPAPPFQSSPYSFHEWRNTKTTNSQS
SSSTRQRANPLSDLGLSDDDWDRPPLGGFTVGHDGTEPDQEENFWSQALEDLETCGQSGI
LRELEESGKETHLLTLATIMSGSTLSLNHDPTPLRSTLGRQASFQERSSSRPQVTPRSNT
LPSDPQRRAFAMRKMRQEVNEILNQNPVELHKLTLEKASDLEDFGFSVSDGLLDRGVYVN
NIRPGGPAERGGLRAYDRILQINHVRTRDFDCCLVVPLIAESPNRLDLVISRNPTSSSLL
ANHTDGTANISHSPQPTGSDLGPSELSIGQVEDGGPIKWSQPGDGLGASIGVGQVNNSSL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcccggctggaagaaaaacatcccggcctgtctccaaccggaccaggagggagatgag
gggccgtacaccaaacactctgccgggtcgagacctccagatggagcgctggccatcagg
aggcaaagtataccagacgagtttcggggctgctcggtggtggagctgatgaagaaggag
gggacgacactaggtctgacagtttcaggcggcattgacaaagatgggaaaccgcgagtt
tcaaacctacgtcagggaggtatcgctgccaggagcgaccagctgaacgtgggcgactac
atccgctctgtgaatggcatcaacctagccaagttcagacacgatgaaatcatcagtctc
ttgaagaacgttggtgagcgagtcgtcctggaggtcgagtacgagctgccacctgtctct
gtgcaggggtcaggggtcatgtttaagaacgtggaggtcacgcttcacaaagaaggaaac
agctttggcttcgtcatcagaggtggagcccacgaagacaggaacaagtctcgtcccatc
gtcataacaaccatcaggccaggtggaccggctgacagagaaggaactgtcaaaccaggc
gatcggttgctaagcatcgacgggattcgtctccacggcagcacgctgtcagaggccatg
agcatcctaaagcagtgcggacaggaagcaacactgctcattgagtacgacgtctcagtg
atggactcggttgccacggcgtcaggcccgttgctggtggaggttgccaaggcaacaggc
tccagtctgggcgtggctctgtccacctctatgttctgcaacaagcaggtcatcatcatc
gacaaggtcaaaccagccagcatagcagacaggtgtggtgctcttcatgcaggagatcac
attttgtctgttgatggaaagtcgatggagttttgttctttggctgaagccactcagcta
ctctctgcctcttgtcagaccgtccgcatggagatcctgccgcaacaccaggcccgaccg
gccctgaacgcaccacaacacgtcaaggtgcagcgtagtccccgccccctcccttgggag
accggaggctccgcccccatcctccccccttaccactacaacacgtaccaccctgaccaa
tcagctgccagatcgcacaaccgccatacaaacaaccctcctctcagccactcgttctct
cctggctccatgtcagcctatagtctctcgtccctcaacatgagcaccctgcccaggaac
atgtatcccacgagtccacggggcacgctgatgaggaggaaggccaagaagaaagacttt
aagagctcattgtctctcgcgtccagcaccgtgggtcttgccggtcaggtcgtccacacg
gaaactacagaggtgacgttgctaggtgatggcatcatggggttcggcctgcagctgcag
ggtggagtctttgccacggaaacgttatcatcaccacctctcattgcttacattgacccc
gacagccccgcagagagatgtggtatcctgcagatcggtgacaggatcttgtccataaat
ggagttcctactgaagactccactctggaggaaaccaatcagctgctcagagactcgtca
atcactgctcagctcacgctggagatcgagtttgatgtggccgagtcagtcatcccgagc
tctggaacgttccacgtgaaactcccgaagaaaccaggagtggagctgggaatcaccatc
agctctccgtccaacaggaaaccaggtgatcctctgatcatctctgacatcaagaaaggc
agcgttgcccacaggacagggacgttggagcttggagacaagctgctggccattgataac
atccgggtggagaactgctcgatggaggaagctgttcagatcttgcagcagtgtgaggag
cttgtcaaactgaagatccgcaaagacgaagacaactcagatgaacaggaagtgtctggc
agcatcatctacacggtggagctgcagaggtacggtggcccactgggaatcaccatctca
ggcactgaggagccattcgaccccatcatcatttcttcactgagcaagggggggctggct
gagaggaccggtgcgatccatgtcggagatcgtattcttgcaatcaacagcagcagcttg
aaggggaaaccgctgagtgaagccattagtctgctgcagcaggcaggagagacagtcaca
ctgaagatcaagaaacagggagaactgtcaagtccgaagtcctgtgtgattggtccaggt
ctggggtcggggacggggcttggtcatgaaaaccaagatggggaggatgagcctgtcatc
atggttgcgccgccgtcgagccagagagcgttcactactctgccgtctgtcgacagcgcc
gtggagtcctgggacggatccaacatggacagcagcttcaccacgccggctccaccattt
cagtcgtctccgtacagtttccacgagtggcgcaacactaagacaaccaacagccaatca
tcgtcctccactcgccagagagccaatccgctgtcagatctgggtctgagtgatgacgac
tgggaccgcccaccacttggagggttcactgtggggcatgatgggacagaaccagaccag
gaggagaacttctggtctcaggctctggaggatctggagacctgcggccagagcggcatc
ctcagagaactggaggagtctggaaaggagacgcacctcctcactctggcaaccatcatg
tcaggctccaccctcagtctgaaccatgatcccacccctctgcgcagcactctggggcgc
caggcgagtttccaggaacgcagcagctcccgaccacaggtgactccaaggtccaacacc
ttgccctctgacccccaacgccgagcctttgccatgaggaagatgaggcaggaagtcaat
gagatcctaaaccagaaccctgtggaactccacaagttgactctggagaaggcctcagac
ctggaggattttggcttcagtgtttctgatggtctgttggatcgtggcgtctacgttaac
aacatccgaccaggaggcccagcggagaggggcggcctccgagcctatgaccgaatacta
cagattaaccacgtgcggaccagggactttgactgctgcctcgtcgtccctctgatagca
gagtctccgaatcgcttggatctcgtcatcagtcgaaaccccacctcttcctctttgcta
gccaatcacactgatggcaccgccaacatcagccactcccctcagccaactggcagtgac
ctgggaccatcagagctttctattggccaggtagaggatggtggtccaatcaagtggagc
caacctggagatgggctgggggcaagtattggggtggggcaggtgaataatagctcatta
tag
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