Lates calcarifer (barramundi perch): 108901464
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Entry
108901464 CDS
T04895
Name
(RefSeq) matrilin-4 isoform X1
KO
K19467
matrilin
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108901464
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108901464
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
EGF_CA
VWA_2
EGF
Matrilin_ccoil
hEGF
EGF_3
EGF_LRP2
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
108901464
NCBI-ProteinID:
XP_050930519
UniProt:
A0AAJ8BEX0
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Position
LG12:1373783..1396848
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AA seq
703 aa
AA seq
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MRQLRALCGFILLTLAVLAAARPKAGPEQKCKSGPVDLVFLIDSSRSVRPHEFETMRKFM
IDILNTLDIGPNATRVGVVQYSSQVRSEFSLKTHSRLETMVKGINQIIPLAQGTMTGLAI
RYVMNAAFTAEEGDRPKVPNVAVIVTDGRPQDRVAEVAAEAREKGIEIYAVGVARADMTS
LRAMASPPFEDHVFLVESFDLIHQFGLQFQDKLCGVDLCLESDHGCEHICESSPGSYHCL
CLPGYTLNDDGKTCAAIDLCAEGKHDCEQICVSSPGSFTCDCNKGYKLNDDKKTCSMIDY
CSFGNHSCDHECVSVLNGYHCRCNEGYRLLDDGKTCQAIDLCAEGKHDCEQICVSAPGVF
TCDCNEGYTLNEDKKTCTPIDLCAEGKHDCEQICISAPGTFTCDCNKGFKLNKDKKTCTN
MDLCNTVEHGCEHQCVSTPGSYYCICPEGQLLQEDGKSCGTCKSANIDLVLLIDGSKSVR
PQNFELVKKFVNQVVDSLDVSAHGTRVGLVQYSSRVRTEFPLNMYHSADEIKAAVMKVEY
MEKGTMTGLALKHMLENSFSEAEGARPASRNIPRIGLVFTDGRSQDDITEYAKKAKEAGI
TMYAVGVGKAVEDELREIASEPVEKHFYYTTDFTAISTIAENLKLNVCPEESQGEIEVKD
PCACESLVEFQQATMSSLEQLTQKLAGMTARLEQLENQLLSRK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctcagagcactttgtggattcattctcctgaccctggccgtcctcgccgcc
gccaggccaaaagcaggtcctgagcagaaatgtaagtctggtcccgtggacctggtcttc
ctcatcgacagctcccgcagcgttaggccacatgagtttgagaccatgaggaagttcatg
attgacatcctcaacaccctggatattggacccaacgccaccagagtgggagtggttcag
tactccagccaggtccgcagtgagttctctctgaagacgcacagcaggctggagaccatg
gtgaaaggcatcaatcagatcattcctctcgctcaaggcaccatgaccgggctcgccatc
agatacgtgatgaatgcggccttcaccgcagaggagggagacaggccaaaggtccccaac
gtggccgtgatcgtgacagacggacgtcctcaggaccgcgtggcggaggtggcagctgag
gccagagagaaaggcatcgagatctacgctgtgggggtggccagggccgacatgacatca
ctgagagccatggcatccccgccattcgaagaccacgtcttcctggtggagtcgttcgat
ctgattcaccagtttggactgcagttccaggacaagctctgtggtgtggatctgtgtctg
gagtcggatcacggctgcgagcacatctgtgagagctccccgggctcctaccactgcctc
tgtctgcccggatacactctgaacgatgacgggaaaacatgtgcagccatagatctgtgc
gctgaggggaaacacgactgtgaacaaatctgcgtcagctctcctggctccttcacctgc
gactgcaacaaaggatacaaactgaatgacgacaagaagacctgctcaatgatcgactac
tgttcgtttgggaaccacagttgtgatcatgagtgtgtgagtgtgctcaatggctatcac
tgccgctgtaacgagggatacaggctgctggacgacggcaagacctgccaggccattgac
ctgtgcgctgaggggaaacatgactgtgaacaaatctgtgtcagcgcaccgggcgtcttc
acctgcgactgcaacgaaggatacacactcaatgaggacaagaagacctgcacacccatt
gacctgtgtgctgagggaaagcacgactgtgaacaaatctgcatcagtgcaccgggcacc
ttcacctgcgactgcaacaaaggattcaaactcaacaaagacaagaagacctgcacaaac
atggacctgtgtaacacagtggagcacggctgtgagcaccagtgtgtgagcactccagga
tcttactactgcatctgtccagagggacagctgctgcaggaggacggcaagagctgcggc
acctgcaagtctgccaacattgacctggtgcttctgatcgacggctccaagagcgtccgc
cctcagaactttgagctggtcaaaaagtttgtcaaccaggttgtggactctctggacgtg
tctgctcatggtaccagagtcggtctggtccagtactccagccgggtcaggacggagttc
cctctcaacatgtaccactctgctgatgagatcaaagctgcagtcatgaaggtggaatac
atggagaaaggtaccatgacaggtctggcactaaaacacatgctggagaacagcttctct
gaggcagagggcgctcgtcctgccagccgtaacatccccaggatcggactggtcttcaca
gacggacgctcccaggacgacatcactgagtacgccaagaaggccaaagaagccggcatc
accatgtacgctgtgggcgttggaaaagctgtggaggatgagcttcgtgagatcgcatct
gagcctgtggagaaacatttctattacaccaccgacttcactgccatcagcaccatcgct
gagaacctcaaactcaacgtctgcccagaggagagtcagggggagattgaggtgaaggac
ccctgtgcctgtgagagtctggtggagttccagcaggccaccatgagcagcctggagcag
ctcacacagaaactggctgggatgactgctcgtctggagcagctggagaaccagcttctc
tccaggaagtaa
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