Lates calcarifer (barramundi perch): 108901465
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Entry
108901465 CDS
T04895
Name
(RefSeq) recombining binding protein suppressor of hairless-like protein isoform X1
KO
K06053
recombining binding protein suppressor of hairless
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108901465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108901465
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Other transcription factors
Others
108901465
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GFIT
Motif
Pfam:
BTD
LAG1-DNAbind
TIG_SUH
TIG
Motif
Other DBs
NCBI-GeneID:
108901465
NCBI-ProteinID:
XP_018558448
UniProt:
A0AAJ7QKH0
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Position
LG12:complement(1360683..1378414)
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AA seq
548 aa
AA seq
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MDESDFVDDDGKDTPMHQPGYSQADTALLYPPSLSPDPVSPLTHLGTLLAGHDAPRTGNG
WDRRLDPGFQGCQLLGTTRETGREAHADQSVIILHAKVAQKSYGNEKRFFCPPPCVYISG
HGWRVMQDHLKAAGYGDSVYRVYGYMCLDSSSQSQADTFKLVFDEQPNSRQMFACAKSLF
ISDQDKRKHFRLLLRLFLGNRQEVGSFQSRMIKVISKPSQKRQSMKNADLCISSCSRVAL
FNRLRSQTVSTRYLSVDRGAFVASARQWTAFTITMGKLEDQRADQGDFVLSEGFICYGCV
VQLVCTESGVALPPMVIRKVNKQHAILDVDEPVSQLHKCAFQFRDSPQSYLCLSNDTIIQ
YQAPSSVKDPSRVVLNDGSCWTIIGVETVEFTFNQGLACIQTPVSPFPVITGLEVNGGGH
VAMLEVHGENFSPHLKVWFGNSEAETMFKSPKSLLCVVPDVSVFSDGWRCLRRIITVPLS
LIRLDGLIYRTTFSFTYTPELQPPPSVRGAGGGGKRDGGVDGGQEDDVLLETIHQEFTRA
NFHLFMQS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcagactttgtggacgatgacgggaaagacacaccgatgcaccagcctgga
tactctcaggcagacaccgcgctgttataccccccctctctgtcccccgacccggtcagc
ccgctgactcacctggggacgctgctggccggacacgacgcaccgaggaccggcaacgga
tgggacaggagactggacccagggtttcaaggctgtcagttactgggaacaacaagggaa
acaggaagagaagctcatgcagaccagagcgtcatcatcctgcacgccaaggtggctcag
aagtcctacggcaacgagaaaaggttcttctgccctcctccgtgtgtttacatcagcggc
catggatggagggtcatgcaggatcacctcaaagcggctggttatggagactctgtatat
cgagtgtatggttacatgtgtctggacagctccagtcagtctcaggcagacacattcaaa
ctggtcttcgatgaacagccaaactccaggcagatgttcgcctgcgccaagtccctgttc
atctccgaccaggacaagaggaaacacttccgcctgttgctgcgactcttcctgggcaac
agacaggaagtgggttctttccagagcagaatgatcaaagtcatctccaaaccctcccag
aagagacagtccatgaagaacgccgacttgtgtatctcctcgtgctccagagtagctttg
ttcaaccgtctgcgctcacagacggtcagcactcgttacctctcagtggacagaggagct
tttgttgccagcgccagacagtggacggcgttcactatcaccatgggtaaattggaggac
caacgtgctgaccaaggagactttgtgctgagcgaaggcttcatctgttacggctgtgtg
gtccagttagtgtgtactgagtctggagtagcgctgccacccatggtgattcgaaaggtc
aacaagcagcacgccatcttagacgtggacgagcctgtttctcagctccataaatgtgcc
ttccagttcagagacagtcctcagtcctacctgtgtttatccaacgacaccatcatacag
taccaggctccctccagcgtcaaagaccccagcagagtggtgctgaacgacggatcctgt
tggaccatcatcggagtggaaacagtggaattcacctttaatcagggtctggcctgcatc
cagacaccagtcagtccttttcctgttatcacagggttagaggtgaatggtgggggacac
gtcgccatgctggaagtccatggagaaaacttcagccctcatctcaaagtctggtttggc
aacagtgaagctgagaccatgttcaagtctcccaaatctctgctctgcgtcgttcctgac
gtctctgttttcagtgacggctggcgctgtctgcgccgcatcatcaccgtccctctgtct
ctcatccgattggacggcctgatttatcgcacaacgttcagtttcacctacacccccgag
ctccagccgcctccgtccgtccgaggggcaggaggaggagggaagagagacggaggggtg
gacggaggccaggaggacgatgtcctgttagagaccatccatcaggagttcaccagagcc
aacttccacctcttcatgcagagttaa
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