Lates calcarifer (barramundi perch): 108901503
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Entry
108901503 CDS
T04895
Symbol
prom1a
Name
(RefSeq) prominin-1-A isoform X1
KO
K06532
prominin 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108901503 (prom1a)
04090 CD molecules [BR:
lcf04090
]
108901503 (prom1a)
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108901503 (prom1a)
CD molecules [BR:
lcf04090
]
Proteins
108901503 (prom1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
DUF3587
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-GeneID:
108901503
NCBI-ProteinID:
XP_018558513
UniProt:
A0AAJ7VKJ6
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Position
LG8:21551193..21630890
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AA seq
892 aa
AA seq
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MLKTGVVLLMLLLLGVLSASGELQQETETRRLPPPGKLDFGYVPAGVYETLAHYEPGPIG
ILFHMVHTFLYVVQPNAFPQDLIVRLAKDKFGAIQTEYQKAIYYEIGFLVCAAVGLLFTV
LMPIVGLFFCMCRCCDNCGGEMHQRQRKNADCRRGLLGTLLFSTSLVITIGVLCAYAANQ
NLSSQVKNIRRLVNSNMRDLHTFANDTPMQIDYLISQYATAKKKVIYDLNNIGPLLGGRI
HDQLDKEVHPALDRVLNMAGAMRETKEALENVSVSLEVLQEGTGKLNFNLSLVRTNINRT
LNDPGCRDEESDATTAQLCRNIRQSLSKLKISANFTRLPSVNAPLENVNNVLRTDLSAIV
QRGYSSLNDTPQMVIEQTRGVVESVQNLVDGIGNNISSFSKVFPVQSCLSNFTIFISHAH
AKIEDHYPEIDQMDFYRWIGCISLCCMVVLVLAFNYLGLLCGTLGYDKHASPTTRGCISN
TGGTMLMAGVGFSFIFSWVLMGVVTVIFLAGGNMEKLVCEPFHTKELFKVVDTPYLVNPE
WKNFIPGYMYNDSDLDLTAESLYSTCKENKGIYLAMRLDKVFNISSFLNTTVFTKDVVSQ
LDSVKIDLRGIILLEAEGKQNLLDFSEAGLSEINYADYLEEVNKGVTVVDLLSYARELEA
QTDLMPRGPLQTALKGHIGTLRQIHSQQITPMEQAMKYVRARSALNQSMRFLERTASDLP
NKVLAVLEAIEAAQYLISKNATHLINRETGKYTATIVGYFHQYIEWVKTSLAMEVAPCKP
FSNMVDTAEIIACSFLVDSMNVFWMGLGCSTLFLLPSIILAVKLAKYYRRMDTEDVYDDI
ETIPMKTMEIGNNGYHSERSQGIPNPMMTSIPTYDTMNRFPRASAPPRHIDW
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaccggggtcgtcctcctgatgctgctgctgctcggggtgctttcagcgtcc
ggcgaactccagcaagagacggagacgcggagactcccacccccgggaaagttggatttc
ggttatgtgcctgcgggagtttacgaaacactggcccattacgaaccgggaccgataggg
attctgttccacatggtgcacacttttctgtacgtggtgcagcccaacgctttcccccaa
gatcttattgtcagactggcaaaggacaagtttggagccattcagacagaatatcaaaag
gccatctactacgagataggcttccttgtgtgtgcggcggtgggcctgctgttcaccgtt
ctgatgccgatagtcggactcttcttctgcatgtgccgctgctgtgacaactgcggcggc
gagatgcaccagcgccagaggaagaacgcggactgccggcgtggcctgctgggaacgctg
ctcttctccacctcactggtcatcacgatcggagtgctgtgtgcatacgctgccaaccag
aacctgagctctcaggtgaagaacatacgcagactggtcaacagcaacatgagggacttg
catacctttgctaatgatacaccaatgcaaattgattacctaatatcccaatatgccaca
gccaagaaaaaagtcatctatgacctaaataatataggtccactgctgggtggaaggata
catgatcagttggataaggaagtccatcctgccttggacagagtgctcaatatggctgga
gccatgcgagaaaccaaggaggccctggagaacgtcagtgtgtctctggaagtcctccag
gagggaacaggtaaactcaacttcaacctgagcctggtccggaccaacatcaaccgcacc
ctcaatgaccctggctgtcgtgacgaggagtcagacgccaccactgcccagctctgccgc
aacatccgccagtcactgtccaagctgaagatcagcgccaacttcacacggctacccagt
gtaaatgctccgctggaaaacgtgaacaatgtattgaggacggacctcagcgctatcgtc
cagaggggctattcctctttgaatgacacaccacaaatggtgattgaacaaaccagaggt
gttgtagagagtgtacagaatttggtggacggcattggcaataacatcagcagcttttcc
aaggtgttcccagtgcagagctgcctgtccaacttcaccatcttcattagccatgcccac
gctaaaattgaagaccactaccctgaaattgaccaaatggacttctacaggtggattggc
tgtatttccctttgctgcatggtggtcctggtcctagccttcaactacctgggcctcctg
tgtggcacgctgggatatgacaaacacgcctcgcctacaacacgaggctgcatctccaat
acgggaggaacgatgctcatggccggcgtcggatttagtttcatcttctcctgggtgctg
atgggagtggtgaccgtcatattcctggctggagggaacatggagaaacttgtttgtgaa
cctttccacaccaaagagctcttcaaggttgtggacaccccatatctggtcaacccagag
tggaagaacttcatccctggctacatgtacaacgactccgacctggacctgacggcagag
agcttatacagtacttgcaaagagaacaaaggcatctacttggccatgcgtctggacaaa
gtcttcaacatctcctctttcctcaacactacagtgtttactaaggatgtggtgagtcag
ctggacagtgttaagatcgacctgagaggaataatcctgttagaggccgaggggaagcag
aacctcttggatttctccgaagcagggctgtcagaaatcaactatgccgactatctggaa
gaggtgaataaaggagtgactgtggtggacctgctctcatatgccagggaactggaggcc
cagacagacctcatgcccaggggccctctgcagaccgctctaaaaggccacatcggcact
ctgcgacagatccacagtcagcagatcacccccatggagcaggccatgaaatatgttaga
gcgaggagtgccttgaaccagagtatgaggttcctggagagaacagcctcagatctgccc
aacaaagtcttagcagttcttgaggccattgaagctgcccagtatctcatctccaagaat
gctacacatttaataaatcgggaaacaggaaaatacacagcgaccatagttggctacttc
catcaatacatagaatgggtcaaaacctctctggctatggaggttgcaccatgcaagccc
ttcagtaacatggtggacacggcggaaatcatagcttgcagtttcttggtcgactctatg
aacgttttctggatgggcctgggctgcagcactctcttcctgctcccgagcatcatcctg
gcagtgaaactagccaagtactaccgcaggatggacacagaggatgtttacgatgacatt
gagacaattcccatgaaaactatggaaattggtaataatggttatcatagtgagcgttca
caaggtatcccaaatcctatgatgacaagcatccctacctatgacactatgaacaggttc
ccgcgggcctcggctcctccgaggcacatcgactggtga
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