Lates calcarifer (barramundi perch): 108901504
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Entry
108901504 CDS
T04895
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00061
Fatty acid biosynthesis
lcf00071
Fatty acid degradation
lcf01100
Metabolic pathways
lcf01212
Fatty acid metabolism
lcf03320
PPAR signaling pathway
lcf04146
Peroxisome
lcf04216
Ferroptosis
lcf04920
Adipocytokine signaling pathway
Module
lcf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108901504
00071 Fatty acid degradation
108901504
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108901504
09143 Cell growth and death
04216 Ferroptosis
108901504
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108901504
03320 PPAR signaling pathway
108901504
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108901504
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108901504
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108901504
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108901504
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of breast milk
108901504
Exosomal proteins of breast cancer cells
108901504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108901504
NCBI-ProteinID:
XP_018558535
UniProt:
A0A4W6G6C7
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All DBs
Position
LG8:complement(3247588..3264260)
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AA seq
698 aa
AA seq
DB search
MLSQEFFQKLRMPDLNDVSQYIRSASTPMLVSMGAVAAATTYYLATRPKALPSVCDLSMQ
SVEVPGGDLARRSPLQSGDGHLAHLYDDGRTLYEFFLRGARVSNNGPCLGSRKPKQPYEW
MSYREVMERTENLGSAFLHKGHSKTTDPHIGIFSQNRPEWTISELACYTYSLVSVPLYDT
LGTEAIAYIIDKASISTIICDVVDKVNLVLDCVKDKTHSVKTIVLMETPSAELVSRGQQA
GIHIFSLQEMEAIGKANHHQPVPPQPEDMAVICFTSGTTGNPKGAMLTHGNIVSNCSAFI
KMTEFSCTFSPSDVHISYLPLAHMFERVVQGVMLVHGARIGFFQGDIRRLPDDLNTLKPT
VFPVVPRLLNRMYDKIFGQANTSLKRWLLGFAYRRKEAEMMKGIVRRDSIWDRLIFRKVQ
ASLGGCVRLMVTGAAPISPTVLTFLRAAIGCQFYEGYGQTECTAGCTMTMPGDWSAGHVG
APLPCNSVKLVDVPEMNYLAVNGEGEVCVKGTNVFLGYLKDPEKTAETIDEDGWVHTGDI
GKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENVYIRSDAVAQVFVHGDSLQACLVAVV
VPDPDFLSGWTKRTLGLEGSYQELCGRKEVKAAILEDMLRLGKDGGLKSFEQVKAIYIHT
ELFSIENGLLTPTMKAKRNELRQHFKPQIEELYAEIKM
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctgagccaggagttctttcagaagctgaggatgcctgatttgaatgatgttagtcag
tacatcaggagcgcctctacccccatgttagttagcatgggggcagtggctgccgcgaca
acctactacctggcaacacgacccaaggccctcccgtcagtctgtgacctgagcatgcag
tcagttgaggttccgggtggagatttggcgcgcagatcacctcttcagagtggagatggt
cacttggcacatctatatgatgatggcaggacattgtatgagttcttcctcagaggggcc
agagtctccaataatggtccctgtttgggctccaggaaaccaaaacagccctatgaatgg
atgtcctacagagaggtaatggagcgaacagagaatttgggctcagcatttcttcacaaa
ggacactccaagaccaccgacccccacattggcatcttctctcagaacagacctgagtgg
accatcagtgagctggcgtgttacacctattctctggtgtcagtccctctgtatgacaca
ctgggaacagaggccattgcctacattatagacaaagcttccatctctactataatatgt
gatgtggtagataaagtcaacttggtactggactgtgttaaggacaagacacactctgtg
aaaaccattgttctaatggagacccccagtgctgagctggtcagcagggggcaacaggct
ggaatccacatcttcagcttgcaggagatggaggctatcgggaaggccaaccatcaccaa
ccagtgcctccacaacctgaggacatggcagtcatctgcttcaccagtggaacaacagga
aatccaaagggagctatgttgacacatgggaatattgtgtccaactgctcagccttcatc
aaaatgacggagttttcctgtacgtttagtcccagtgatgtccatatctcctacctgccc
ttggctcacatgtttgagagagtagtacagggagtgatgttagtgcatggagccaggatc
ggctttttccaaggagatattcgtcggctgccagatgacctgaacacactgaaacccact
gtgttccccgtggtgcctcgactcctaaacagaatgtatgataagatctttggccaggcc
aacacctctttgaagcgatggctgctgggatttgcctacaggaggaaggaggcagaaatg
atgaaaggcatcgtgaggagagacagtatctgggatcgacttatcttcaggaaggttcag
gccagcctcggaggttgcgttcgtctcatggtaacaggagcagctcccatctctcctact
gttctcactttcctcagagctgcaataggatgtcagttctatgaaggctatggacaaaca
gagtgtactgctgggtgcaccatgaccatgcctggggactggagtgcaggtcacgttgga
gctcctctgccctgcaactctgttaaactggtggatgtgcctgagatgaactatctggct
gtaaatggagagggagaggtgtgtgtgaaaggtacaaatgtgttcctgggctatctgaag
gatccagagaagacagcagagactattgatgaggatggatgggttcacaccggagacatt
ggaaaatggcttccaaatggcacgctgaagattgtggacaggaagaagcacatctttaag
ctggcacagggggagtacattgctcctgaaaagatagagaatgtctacattaggagtgat
gcagtggcacaggtctttgtgcatggagacagtctgcaggcctgtctggtagcagtggtg
gtccctgaccctgacttcctgtctggctggacaaagaggacactgggactggagggaagc
taccaggaactatgtggcagaaaggaagtcaaagcagccatcttggaggacatgctgcgg
ttgggcaaggatggaggcctcaaatcctttgagcaggtgaaggccatctacatccacact
gagctgttctcaatcgagaacggcctgcttactccaacaatgaaggccaagaggaacgaa
ttgcggcaacacttcaaaccccagatagaagagttgtacgctgagataaaaatgtag
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