Lates calcarifer (barramundi perch): 108901510
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Entry
108901510 CDS
T04895
Name
(RefSeq) Bardet-Biedl syndrome 7 protein isoform X1
KO
K16749
Bardet-Biedl syndrome 7 protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108901510
Cilium and associated proteins [BR:
lcf03037
]
Primary cilia and associated proteins
BBSome
108901510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS2_Mid
FG-GAP_3
RNase_E_G_Thio
Motif
Other DBs
NCBI-GeneID:
108901510
NCBI-ProteinID:
XP_018558528
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All DBs
Position
LG8:complement(21671176..21676902)
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AA seq
713 aa
AA seq
DB search
MELHLNRVDYIQVGVTSQKTMKLLPALGKKATQKVAIADHDGILTCFGMKKGEAVPVFKT
LPGQKIARMDLGGAVGTPQEKIFVCSGSQVRGFTKKGKQFLTFEANLTETINAMHVSGAD
LFVCASYIYNHYCDCKDQDYYLSGDKINDIMCLSSENLTRLVPVLACQDRVLRVLQGSEL
AYEIEVPGPPSVLELFNKDGGEEILYGTTDGKIGLVQIGERSAATKWEIDNDKKKGGILC
IDTYDIIGDGVNDILVGRDDGTVEVYGFDSSSEPTLRFDHILSESVTSIQGGCVGKESYD
EVLTATYTGWVTGLTTEPQKAEAGPGDEVRMSKETQSKVEALRAELEQLQVKVLQGREQY
QQTSQSSTAVSAVPVFSINDKFTLCQDDASYSLTLEVQTAIDNLLLQSDVPIDLLDVDKN
SAVVSFSECDSEQPNGNFLLATYRCQANTTRLELKVRSIEGQYGTLQAYITPRLQPKTCQ
VRQYQIKPLSLHQRTHSIDQDRPMNRLSLVGQFSFAEIHSWVVFCLPEVPEKTPAGESIT
FYFHNTFLGTQLEANYCKGEGHFRSDNISTISILSDVLSKEATKRKINLNISYDINDDSV
SHTLKMIHPKLEYQLLLARKVQLIDALKELQVHEGNADFLIPEYRNILDESANLLEEYKK
QPAHLERLYGMITDLFIDKFKFKGQNVKTKVSSLLEILDNYELNSLLDFFNEA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagctccacctaaatcgagttgattatattcaggttggtgtgacctctcagaaaact
atgaagctgcttccagcacttggaaaaaaggcaactcaaaaggttgctattgctgatcac
gatggtatattgacatgttttgggatgaagaagggagaagcagtgcctgtgtttaaaaca
cttccagggcagaaaatagccagaatggaccttggaggagctgtgggaactccccaggag
aagatctttgtttgctctggttctcaggtccgaggattcaccaagaagggaaaacagttc
ctcacctttgaagccaacctcactgagaccattaatgccatgcatgtttctggtgctgac
cttttcgtgtgtgcaagttacatctacaaccattactgtgactgcaaggaccaggactac
tatctctctggagacaaaatcaatgatatcatgtgtttgtcctctgagaaccttactcgc
ctcgtcccggtcctggcatgccaagatcgggttctcagagtgttgcagggatctgagctt
gcttatgaaattgaagtccctggccctccttctgtcttggaattgttcaacaaagatgga
ggagaggaaatcctctatggaactacagatggtaaaataggattggttcagatcggtgag
cgttcagctgcgaccaaatgggagattgacaatgacaaaaagaaaggaggaattctttgc
attgacacctatgacattatcggtgatggagtgaatgacattctggtgggcagggatgat
ggaacagtagaggtttatggttttgacagctccagtgagcccacattacgttttgaccat
atactgtcagaaagcgtgacttccatccagggcggctgtgtggggaaggagtcttatgat
gaggtcttgactgccacttatacaggatgggtgactggtttgaccactgagccccagaag
gctgaagctgggcccggagatgaagtcaggatgagtaaggagacccagtccaaagtagaa
gcattgagggcagagctggagcagctgcaggtcaaagtcctgcagggacgagagcagtac
caacagacctctcagtcgagcacagccgtctctgctgtgcccgtctttagcattaatgac
aagttcaccctctgccaagatgatgccagctacagcctgaccctggaggtgcagactgcc
atcgacaatctactgctccagagcgatgtccccatagacctgctggatgtggataaaaac
tcagctgttgtcagtttcagtgagtgtgactcggagcagcctaatgggaacttcctcctg
gccacgtacagatgtcaggctaacactaccaggcttgaactcaaggtgagatccattgag
ggacaatatggcacactgcaggcctacatcacccctagactgcaacccaagacctgccag
gtccgccagtaccagatcaaacctctgtctctccaccagcgcacacacagcatagaccaa
gacaggcccatgaacaggctcagtctggtgggacagttcagttttgcagagatccactcc
tgggtggttttctgtttgccagaggtgcctgagaaaacaccagcaggagaaagcatcact
ttttatttccataacactttcctcggcacacagcttgaagcaaactactgcaaaggagag
ggtcacttcaggtcagacaacatctctaccatctccatactaagcgatgtcctctctaaa
gaagctaccaagcggaaaatcaatctcaacatttcatacgatatcaatgatgactctgtg
agccacacccttaaaatgatccatccaaagctggagtaccagttgctgctggctagaaaa
gttcagcttattgatgctcttaaagagcttcaggttcacgagggaaacgctgacttcctc
atcccagagtaccgcaacattttggatgagtctgccaatctcctggaggagtacaagaag
cagccggcgcacctcgagaggctttatggaatgatcacagacctcttcatcgacaagttc
aagtttaaaggccagaatgtgaaaaccaaggtgtcctcgttattggagatacttgataat
tatgaattaaattctctcttagactttttcaatgaggcataa
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